Atlantibacter hermannii: NCTC12129_03660
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Entry
NCTC12129_03660 CDS
T05790
Symbol
gatR_1
Name
(GenBank) galactitol utilization operon repressor
KO
K02436
DeoR family transcriptional regulator, galactitol utilization operon repressor
Organism
ahn
Atlantibacter hermannii
Brite
KEGG Orthology (KO) [BR:
ahn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ahn03000
]
NCTC12129_03660 (gatR_1)
Transcription factors [BR:
ahn03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
NCTC12129_03660 (gatR_1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
GntR
HTH_Mga
HTH_PafC
Rrf2
HTH_5
HTH_20
FaeA
HTH_36
HTH_24
EAP30
MarR
CggR_N
Mga
HTH_IclR
HTH_AsnC-type
Fe_dep_repress
HTH_39
MarR_2
PaaX
HTH_10
TrmB
HxlR
FeoC
HTH_29
Motif
Other DBs
NCBI-ProteinID:
VDZ74504
UniProt:
A0A447LRZ3
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All DBs
Position
1:complement(3298174..3298971)
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AA seq
265 aa
AA seq
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MHLVERRNQILAALTEKGSVQVANLANKFGISEVTIRNDLRELETQGLLVRFHGGATHQR
NNWALAGKGSGNGESHNEVKLEDRTLLSADAKTRIANAAARMVTTGNSVIIDSGSTTLKI
AQQLADAADLIVVTNNLPAAEVLSINQHITLVLCGGTFRHKTRSFHGMHAESVLKGIVAD
YLFIGADGIDIEKGITTFNEGYAISKVMARAAKKVVAVLDSTKFGRIGFNPVLPISDIDV
LITDDGVSQEMIGLLESRNINVVIV
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgcatctggtggaacgaaggaatcaaatactggccgcgctgacggaaaagggaagcgtg
caggtggcgaacctggcgaataagtttggcatttccgaagtcaccatccgtaacgatttg
cgcgagctggaaacccagggattactggttcgcttccacggcggggcgacgcatcaacgt
aataactgggcgctggctggcaaagggagcggaaatggcgaaagccataacgaagtgaag
ctggaagaccgcacgctgctctccgctgacgccaagactcgcatcgctaacgccgctgca
cgcatggtgaccaccggcaacagcgtcattatcgacagcggcagtaccaccctgaagatt
gctcagcagttggctgacgcggcggatttgattgtggtcaccaataatcttcccgctgcc
gaggtgctttccattaatcagcacatcaccctggtgttatgcggcggcacgtttcgccat
aaaacccgttcctttcacggtatgcatgcggaatccgtgttgaagggtatcgtggctgat
tatctgtttattggcgcggatggcatcgatatagagaaagggatcaccacttttaatgaa
ggctacgccatcagtaaagtgatggcgcgggcggcgaaaaaagtcgtggcggtactcgac
tccacaaagtttggccggattggctttaacccggtcttaccgattagcgatattgatgtc
ctgatcaccgatgacggcgtcagccaggaaatgattggcctgctggaaagtcgaaacatc
aatgtggtgattgtttaa
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