Atlantibacter hermannii: NCTC12129_03660
Help
Entry
NCTC12129_03660 CDS
T05790
Symbol
gatR_1
Name
(GenBank) galactitol utilization operon repressor
KO
K02436
DeoR family transcriptional regulator, galactitol utilization operon repressor
Organism
ahn
Atlantibacter hermannii
Brite
KEGG Orthology (KO) [BR:
ahn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ahn03000
]
NCTC12129_03660 (gatR_1)
Transcription factors [BR:
ahn03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
NCTC12129_03660 (gatR_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
GntR
HTH_Mga
HTH_PafC
HVO_A0261_N
HTH_5
Rrf2
FilR1_N
FaeA
HTH_24
HTH_36
EAP30
FokI_D3
HVO_A0114
MarR
HTH_20
MarR_2
HTH_AsnC-type
Mga
CggR_N
HTH_IclR
Fe_dep_repress
PaaX
HTH_10
WHD_RecQ_mid_bact
TrmB
HxlR
FeoC
HTH_39
AprA_N
Motif
Other DBs
NCBI-ProteinID:
VDZ74504
LinkDB
All DBs
Position
1:complement(3298174..3298971)
Genome browser
AA seq
265 aa
AA seq
DB search
MHLVERRNQILAALTEKGSVQVANLANKFGISEVTIRNDLRELETQGLLVRFHGGATHQR
NNWALAGKGSGNGESHNEVKLEDRTLLSADAKTRIANAAARMVTTGNSVIIDSGSTTLKI
AQQLADAADLIVVTNNLPAAEVLSINQHITLVLCGGTFRHKTRSFHGMHAESVLKGIVAD
YLFIGADGIDIEKGITTFNEGYAISKVMARAAKKVVAVLDSTKFGRIGFNPVLPISDIDV
LITDDGVSQEMIGLLESRNINVVIV
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgcatctggtggaacgaaggaatcaaatactggccgcgctgacggaaaagggaagcgtg
caggtggcgaacctggcgaataagtttggcatttccgaagtcaccatccgtaacgatttg
cgcgagctggaaacccagggattactggttcgcttccacggcggggcgacgcatcaacgt
aataactgggcgctggctggcaaagggagcggaaatggcgaaagccataacgaagtgaag
ctggaagaccgcacgctgctctccgctgacgccaagactcgcatcgctaacgccgctgca
cgcatggtgaccaccggcaacagcgtcattatcgacagcggcagtaccaccctgaagatt
gctcagcagttggctgacgcggcggatttgattgtggtcaccaataatcttcccgctgcc
gaggtgctttccattaatcagcacatcaccctggtgttatgcggcggcacgtttcgccat
aaaacccgttcctttcacggtatgcatgcggaatccgtgttgaagggtatcgtggctgat
tatctgtttattggcgcggatggcatcgatatagagaaagggatcaccacttttaatgaa
ggctacgccatcagtaaagtgatggcgcgggcggcgaaaaaagtcgtggcggtactcgac
tccacaaagtttggccggattggctttaacccggtcttaccgattagcgatattgatgtc
ctgatcaccgatgacggcgtcagccaggaaatgattggcctgctggaaagtcgaaacatc
aatgtggtgattgtttaa
DBGET
integrated database retrieval system
