Atlantibacter hermannii: NCTC12129_03779
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Entry
NCTC12129_03779 CDS
T05790
Symbol
dnaX_1
Name
(GenBank) DNA polymerase III subunit tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ahn
Atlantibacter hermannii
Pathway
ahn03030
DNA replication
ahn03430
Mismatch repair
ahn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ahn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC12129_03779 (dnaX_1)
03430 Mismatch repair
NCTC12129_03779 (dnaX_1)
03440 Homologous recombination
NCTC12129_03779 (dnaX_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ahn03032
]
NCTC12129_03779 (dnaX_1)
03400 DNA repair and recombination proteins [BR:
ahn03400
]
NCTC12129_03779 (dnaX_1)
Enzymes [BR:
ahn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC12129_03779 (dnaX_1)
DNA replication proteins [BR:
ahn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC12129_03779 (dnaX_1)
DNA repair and recombination proteins [BR:
ahn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC12129_03779 (dnaX_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_gamma3
DNA_pol3_delta2
DNA_pol3_tau_4
DNAX_ATPase_lid
AAA
AAA_22
AAA_assoc_2
RCF1-5-like_lid
HrcA
ResIII
Motif
Other DBs
NCBI-ProteinID:
VDZ74621
LinkDB
All DBs
Position
1:complement(3406143..3407861)
Genome browser
AA seq
572 aa
AA seq
DB search
MCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRH
SFNALLKTLEEPPAHVKFLLATTDPQKLPVTILSRCLQFHLKALDVDQIRDQLEHILTQE
KIDHESRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTEAVSAMLGTLDDAQALSLIE
ALARAEGDTVMRLLTDAHARGVEWEALLVEMLSLLHRIAMVQLSPAAIGSDMAAIEQRLK
ELARTVPPADVQLYYQTLLIGRKELPWAPDRRMGVEMTLLRALAFHPRAPLPEPQNTQPT
IPAVAAQPVARVEAPSPAAPASSASPQPAVSAALPDATSQLLEARSRLQKAQEGSRTKKS
EPAAPKTARPVSNSALERLASVTERVKAKPASTLKESTPAKPEAYRWKAQNVVEVAPEPV
ATPKALKKALEHEKTPELAAKLAEESLTRDDWARDVSLMKLPKLVEQVALNAWKEQDGQT
ICLHLRPTQRHLNSPAARETLSEAMSQLYGSPIELTIIEDDNLARRTPLEWRQAIYEEKL
AQARESIIADANIQTLRRFFDADLDEESIRPL
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
gtgtgcgataactgccgtgaaattgagcagggccgtttcgttgatttgattgaaatcgac
gccgcatcgcgcacgaaggtcgaagatacccgcgatttgctggataacgtgcaatacgcg
cccgctcgtggacgctttaaagtttatcttatcgatgaagtgcacatgctctcgcgccac
agcttcaacgccctgttgaaaacgctggaagagccgcctgcgcacgtcaaatttctgctg
gcaaccaccgatccgcaaaaattgccggtgacgattttgtcgcgctgcctgcagtttcac
ctcaaggcgctggatgtcgatcagatccgcgatcagctcgaacatattctgacccaggaa
aaaatcgaccatgaatcccgggcgctacagttactggcgcgcgctgcggaaggcagcttg
cgcgatgcgctgagcctgaccgaccaggctatcgccagcggcgacggacaggtcagcacc
gaggcagtgagcgcgatgctgggcacgctggatgacgcccaggcgctgtcgctgattgaa
gcgctggcgcgggcggaaggcgacaccgtgatgcgtctgcttaccgacgcgcacgcccgt
ggtgtggaatgggaagcgctgctggtggaaatgctcagtctgttgcaccgtatcgctatg
gtgcagctttctccggccgccatcggctcggatatggcggcgattgagcaacgcctaaaa
gagctggcgcgtacggtaccgcccgcggatgtgcaactgtattaccagaccttattaatt
ggccgtaaagagctgccctgggcgccggatcggcggatgggcgtggagatgacgctgctt
cgcgcactggctttccatccccgtgcgccgctgcctgagccgcaaaacacgcaaccgact
atcccggctgtcgcggcacagccggtagcccgcgtagaagcgccatcccctgcggctcct
gcgtcgtccgcctcgccgcaaccggcggttagcgcggcgctgcctgacgcaaccagccag
ttgctggaagccagaagccgtctgcaaaaagcccaggagggcagcagaacaaaaaagagt
gaaccggcagcgcccaaaaccgcgcggccggtgagcaactctgcgctcgaacggctggca
tcggtaacagaacgggtaaaagcaaaaccggccagtacactgaaagaaagcacaccggca
aaacccgaagcctatcgctggaaagcgcagaacgttgtggaagtggcaccagagccggtg
gccacgccgaaagcgctgaaaaaagccctggagcatgaaaaaacccccgaactggcggcg
aaactggctgaagaatctctcacgcgcgatgactgggcgcgtgatgtaagcttaatgaag
ctgccgaaactggttgagcaggtggcgttgaatgcctggaaggagcaggacgggcaaacc
atctgcctgcatttacgtcctacccagcgccatttaaactcgcctgcggcgcgggaaacc
cttagcgaggccatgagccagctttatggttcgccgattgaactgactatcattgaagat
gataatcttgcccgtcgtacacctcttgagtggcgtcaggcgatttatgaagagaagctg
gcgcaggcgcgcgagtcgatcattgcggatgccaacattcagactctgcgccgtttcttc
gacgccgatctggatgaagagagcattcgccccctttga
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