Atlantibacter hermannii: NCTC12129_03816
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Entry
NCTC12129_03816 CDS
T05790
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ahn
Atlantibacter hermannii
Pathway
ahn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ahn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC12129_03816 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahn03400
]
NCTC12129_03816 (ung)
Enzymes [BR:
ahn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NCTC12129_03816 (ung)
DNA repair and recombination proteins [BR:
ahn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCTC12129_03816 (ung)
Prokaryotic type
NCTC12129_03816 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
VDZ74655
LinkDB
All DBs
Position
1:3441747..3442427
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AA seq
226 aa
AA seq
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MTTTLTWHDVLADEKQQPYFLNTLKTVEEERANGVTIYPPAKDVFNAFRFTELGDIKVVI
LGQDPYHGPNQAYGLAFSVRPGIQPPPSLVNMYKELEGSIPGFVRPSHGYLESWARQGVM
LLNTVLTVRAGQAHSHARLGWETFTDKVISLINQHREGVVFMLWGSHAQKKGAMIDRERH
YVLQAPHPSPLSAHRGFFGCGHFVKANDYLAQRGETPIDWMPVLPE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaccactactctcacctggcacgacgtgctggccgatgaaaagcagcaaccctacttt
ctgaataccttaaaaaccgttgaggaagagcgggcaaatggcgtcacgatttatcctccc
gctaaagatgtgtttaacgctttccggtttaccgaactgggcgacatcaaagttgtgatc
ctgggccaggacccctatcatgggccgaatcaggcgtacggtctggctttctctgttcgc
ccgggtattcagcctccgccgtccctggtgaacatgtataaagagctggaagggtctatt
cctggttttgtccgccccagccacggttatctcgaaagctgggcgcgccagggcgtcatg
ctgttgaatacggtgctcaccgtacgcgccggtcaggcccattcccacgcccgtcttggc
tgggaaacgtttactgataaggtgatttcccttatcaaccagcatcgcgagggtgttgtg
tttatgctgtggggctctcacgctcagaaaaaaggcgcgatgatcgatcgggaacgccat
tatgtgttgcaggcgccgcacccttccccgctttctgcccatcgtggtttttttggctgc
ggtcatttcgtgaaagcaaacgactatctggcgcagcgcggtgaaacaccgattgactgg
atgccggtattgccggaataa
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