Atlantibacter hermannii: NCTC12129_03817
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Entry
NCTC12129_03817 CDS
T05790
Symbol
yfiF
Name
(GenBank) methyltransferase
KO
K03214
RNA methyltransferase, TrmH family [EC:2.1.1.-]
Organism
ahn
Atlantibacter hermannii
Brite
KEGG Orthology (KO) [BR:
ahn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ahn03009
]
NCTC12129_03817 (yfiF)
03016 Transfer RNA biogenesis [BR:
ahn03016
]
NCTC12129_03817 (yfiF)
Ribosome biogenesis [BR:
ahn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NCTC12129_03817 (yfiF)
Transfer RNA biogenesis [BR:
ahn03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
NCTC12129_03817 (yfiF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
Motif
Other DBs
NCBI-ProteinID:
VDZ74656
LinkDB
All DBs
Position
1:complement(3442468..3443517)
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AA seq
349 aa
AA seq
DB search
MSEEFKGKSGKVKVMYVRSDDDSETRSQNPRTGKGGGRPAASGKGDRRPRRDDKPGASRD
RYNDRDAPSSSPWRTVSRPPRDVNDEHVEQSESTEKGYVDREVIRRQRAEETRVYGENAC
QALFQSRPDSIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDDAELAKASGTEHHGGVCF
IIKKRTGMSVESWLATAGEEDCVLALEDVGNPHNLGGIMRSCAHFGVKGLLVEDASLLES
GAAVRTAEGGAEHVQAISGDHFSDGLERFRQAGYAIVTTSSHKGTALYQSTLPKKMVLVL
GQERDGVSDATFDNADMRIAIPGSGNVESLNVSVATGVLLAEWWRQNKA
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaatttaaaggtaaaagcggcaaggtcaaagtgatgtatgtccgcagcgac
gatgacagtgaaacacgtagccagaacccgcgtaccgggaaaggcggcgggcggcctgca
gcgtcaggaaagggcgaccgtcgaccgcgtcgtgatgataaacctggcgcaagccgtgac
cgctataacgatcgtgatgcgccttcatcatcaccatggcgtacggtttcccgtccgccg
cgcgatgttaacgatgaacacgttgaacagagcgaatcaacagagaaagggtatgtggat
cgcgaagtgattcgccgtcagcgcgcggaagaaacccgcgtctacggtgaaaacgcgtgc
caggcattattccagagccgcccggactccattgttcgcgcgtggttcatacaaagcgtt
acgccgcgttttaaagaagcattacgctggatggcagcgaatcgtaaggcttaccacgtt
gtggatgatgcagagcttgcgaaagcgtcgggtactgagcatcacggcggtgtgtgtttc
attattaaaaaacgcaccggtatgagcgtggagagctggctggcgaccgcaggcgaagaa
gattgcgtgctggcgctggaagatgtcggtaacccgcataatctgggcggcattatgcgt
agctgcgcccatttcggcgttaaaggtttgctggtggaagacgcttcgttgctggaatcc
ggcgcggcggtacgcacggctgaaggcggcgcggaacacgttcaggcgatcagcggcgat
cactttagcgacggcctcgagcgtttccgccaggctggttacgccatcgtcaccacgtca
agccataaaggcacggccctgtatcagtcaacgcttccgaagaaaatggtgctggtgttg
gggcaggagcgtgacggggtatcggacgccacctttgataacgcggacatgcgcattgct
attcccggttcaggcaacgtcgaaagcctgaatgtgtcggtggcaaccggcgtgttgctg
gcggaatggtggcgacagaacaaagcgtaa
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