Atlantibacter hermannii: NCTC12129_03832
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Entry
NCTC12129_03832 CDS
T05790
Symbol
clpB
Name
(GenBank) protein disaggregation chaperone
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
ahn
Atlantibacter hermannii
Brite
KEGG Orthology (KO) [BR:
ahn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ahn03110
]
NCTC12129_03832 (clpB)
Chaperones and folding catalysts [BR:
ahn03110
]
Heat shock proteins
HSP100
NCTC12129_03832 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_16
AAA_22
Sigma54_activat
RuvB_N
IstB_IS21
nSTAND3
bpMoxR
TniB
AAA_18
AAA_7
AAA_14
DUF815
NBD_SMAX1
AAA_24
Zeta_toxin
NACHT
AAA_25
ATP_bind_1
AAA_19
Torsin
PduV-EutP
Motif
Other DBs
NCBI-ProteinID:
VDZ74665
LinkDB
All DBs
Position
1:complement(3455703..3458276)
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AA seq
857 aa
AA seq
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MRLDRLTNKFQLALADAQSLALGQDNQFIEPLHLMSALLKQEGGSVHPLLTSAGVNAGKL
RTDIEQALSRLPQVEGTGGDVQPSQDLIRVLNLCDKLAQKQGDNFISSELFVLAALESRG
VLADLLKAAGANTANINQAIAQMRGGESVNDQGAEDQRQALKKYTLDLTERAEQGKLDPV
IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLAL
DMGALVAGAKYRGEFEERLKGVLSDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLK
PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELH
HHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRII
QLKLEQQALLKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELE
QAKIAIEQARRVGDLARMSELQYGKIPELEKQLAAATQSEGKTMRLLRNKVTDAEIAEVL
ARWTGIPVSRMMESEREKLLRMEQDLHQRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGS
FLFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG
YLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL
GSDLIQERFGDLDYSHMKDMVLTVVSQNFRPEFINRIDEVVVFHPLGQKHIASIAQIQLQ
RLYKRLEERGYQVQMSDEALRLLGENGYDPVYGARPLKRAIQQQIENPLAQQILSGELIP
GKTIELVVKDARIVAQQ
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctggatcgtcttactaataaattccagcttgctcttgccgatgctcagtcactc
gcactggggcaagacaaccaattcatcgaacccttacacttaatgagcgccttgctgaaa
caggaagggggttccgttcatcctttattaacctcagcgggcgtgaatgccggcaaatta
cgcacggatattgaacaggcgttaagtcgcctgccgcaggttgaaggcaccggtggcgat
gttcagccgtctcaggatttaatccgcgttctgaatctttgcgacaagctggcgcaaaag
cagggtgacaattttatttcttcagaactgtttgtcctggctgcgctggaatcgcgcggt
gtcctcgccgatcttctcaaagcggcaggcgcgaataccgcaaatatcaaccaggcgatt
gcgcagatgcgtggaggtgaaagcgtgaacgatcagggggctgaagatcagcgccaggct
ttgaaaaaatatactctcgatcttacagagcgtgccgagcagggcaaacttgacccggtt
atcggccgtgatgaagaaattcgccgtactattcaggtattgcagcgcagaaccaaaaac
aacccagtgctgatcggtgagccgggtgtcggtaaaaccgccatcgttgaggggctggcg
cagcgtatcgtgaatggcgaagtgccggaaggcctgaagggccgccgtgtactggcgctg
gatatgggggcgctggtggcgggtgcgaaataccgcggtgagttcgaagagcgcttaaaa
ggcgtactgagcgatctctcaaaacaggaaggtaatgtcatcctgtttattgacgaattg
cacaccatggttggcgcaggtaaagctgatggcgcaatggacgctggcaacatgttaaaa
cctgccctggcgcggggtgaactgcactgcgtgggcgcaaccacgttggatgagtatcgt
cagtatattgaaaaagatgccgctctggagcgtcgtttccagaaagtctttgttgctgaa
cctacagtagaagacaccatcgctatcctgcgtggcctgaaagagcgttacgagcttcac
caccatgttcaaattaccgacccggctatcgttgcggcggcgacgttatcgcaccgttat
attgccgaccggcagttaccggataaagcgattgacctgatcgacgaagctgcgtccagc
attcgtatgcagattgactcgaagccggaggaactggatcgtcttgaccgacgcattatt
cagttaaaactcgaacagcaggcattgctgaaagagtctgatgaagccagtaaaaaacgt
ctggatatgctgaatgaagagctgtccgacaaagagcgtcagtattcagagctcgaagaa
gagtggaaagcggagaaagcgtctctctccggcacgcagaccatcaaagcggaactagag
caggcaaaaatcgccattgagcaagcacgccgcgttggcgatcttgcccgaatgtcggaa
ctgcaatacgggaaaattcccgagctggaaaaacagctggccgctgcaacccagagcgaa
ggcaaaaccatgcggttgctgcgtaataaagttactgacgcagaaatcgcagaagttctg
gcgcgctggacggggatccctgtctcccgaatgatggaaagcgagcgtgagaaactcctg
cgtatggagcaagacctgcatcagcgtgttatagggcaggatgaggcagtagaagcggtc
tccaacgccatccggcgtagtcgcgctggtttgtccgatcctaaccgtccaatcggttcg
ttcctgttcctcgggccgaccggggtcggtaaaacagagctgtgcaaagcgctggcgaac
tttatgtttgatagcgacgatgcgatggtgcgtatcgatatgtccgagtttatggagaaa
cattccgtgtcacggttagtcggcgcgcctccgggatatgtgggttatgaagagggcggt
tatctgactgaagctgtgcgtcgtcgcccatattccgtcatcctgttggatgaggtcgag
aaagcgcatccggatgtctttaacattctgttgcaggtactcgacgacggacgtcttact
gatggccagggccggacagtggatttccgtaataccgtcgtgatcatgacgtcgaacctc
gggtccgatttgattcaggaacggtttggcgatctggattacagccatatgaaggatatg
gtgctgaccgtggtaagccaaaacttcagaccggagtttattaaccgtattgatgaagtt
gtggtgttccacccgttaggacaaaaacatatcgcttctatcgcgcagatccaattgcag
cggctgtacaaacggcttgaggagcgtggatatcaggttcagatgtctgacgaagcgctg
cggctgcttggcgaaaacggctacgatccggtgtatggtgctcgtccgcttaaacgagcc
attcaacagcaaattgagaacccgcttgctcagcagatactttctggcgagcttattccg
ggcaaaacgattgaactcgtcgtcaaagacgcccgtatcgtcgcacagcagtaa
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