Atlantibacter hermannii: NCTC12129_03854
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Entry
NCTC12129_03854 CDS
T05790
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
ahn
Atlantibacter hermannii
Pathway
ahn02024
Quorum sensing
ahn03060
Protein export
ahn03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ahn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
NCTC12129_03854 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NCTC12129_03854 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NCTC12129_03854 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ahn02044
]
NCTC12129_03854 (ffh)
Enzymes [BR:
ahn01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
NCTC12129_03854 (ffh)
Secretion system [BR:
ahn02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
NCTC12129_03854 (ffh)
Eukaryotic Sec-SRP protein
NCTC12129_03854 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
cobW
AAA_30
AAA_16
Helicase_RecD
AAA_26
AAA_24
AAA_33
AAA_31
VirC1
GlnD_UR_UTase
APS_kinase
T2SSE
YqeC
KTI12
AIP3
AAA_14
TsaE
Motif
Other DBs
NCBI-ProteinID:
VDZ74686
LinkDB
All DBs
Position
1:complement(3473573..3474934)
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AA seq
453 aa
AA seq
DB search
MFDNLTDRLSRTLRNISGRGRLTEDNIKDTLREVRMALLEADVALPVVREFINRVKEKAV
GHEVNKSLTPGQEFVKIVRNELVAAMGEENQTLNLAAQPPAVVLMAGLQGAGKTTSVGKL
GKFLREKHKKKVMVVSADVYRPAAIKQLETLAQQVGVDFFPSDAAQKPVDIVNAALKEAK
LKFYDVLLVDTAGRLHVDEAMMDEIKQVHAAIKPVETLFVVDAMTGQDAANTAKAFNEAL
PLTGVVLTKVDGDARGGAALSIRHITGKPVKFLGVGEKTEALEPFHPDRIASRILGMGDV
LSLIEDIESKVDRAQAEKLANKLKKGDGFDLNDFLEQLKQMKNMGGMASLMGKLPGMGQI
PDNVKSQMDDKVLVRMEAIISSMTLKERANPDIIKGSRKRRIAAGCGMQVQDVNRLLKQF
DDMQRMMKKMKKGGMAKMMRGMKGMMPPGFPGR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtttgataatttaaccgatcgtttgtcgcgtacgctgcgcaatattagcggccgtgga
cgcctgaccgaagacaacatcaaagataccctgcgcgaagtgcgtatggcgctgttggaa
gcagacgtagcgctgcccgtcgtgcgcgaatttatcaaccgcgttaaagaaaaagcggtt
ggtcacgaagttaacaaaagcctgacgcctggtcaggagtttgtgaaaatcgtccgtaac
gaactggttgcggcgatgggcgaagaaaaccagacgctgaatctggccgcgcaaccgcct
gcggtcgtgctgatggcgggcctgcaaggtgccggtaaaaccaccagcgtcgggaagctc
ggtaagtttctgcgcgaaaagcataagaaaaaagtcatggtggtgtccgccgacgtgtat
cgcccggcggcgatcaaacagctggaaacgctggcgcaacaggtcggcgtggatttcttc
ccgtcagacgcggcgcaaaaaccggtcgatattgttaacgccgcgctcaaagaagccaaa
ctgaaattctacgatgtgctgctggtggataccgccggccgtttgcacgtcgatgaagcg
atgatggacgagatcaagcaggttcatgccgcgattaagccggttgaaacgctgtttgtg
gtcgatgccatgaccggtcaggatgcggccaataccgctaaagcgtttaacgaagcgctg
ccgctcaccggcgtcgtgttgaccaaagtcgacggtgatgctcgcggcggtgcggcgctc
tcgattcgccatattaccggcaaaccggtgaaattcctgggtgtcggtgagaaaaccgag
gcgctggagccattccacccggatcgtatcgcgtcccgtattctgggcatgggcgatgtg
ctctcgcttatcgaagatatcgaaagcaaagtagaccgcgcccaggcggagaaactggcg
aacaagctgaagaaaggcgacggtttcgatctgaacgacttccttgagcagcttaagcag
atgaagaacatgggcggtatggcgagcctgatgggcaagctgccgggcatggggcagatt
ccggataacgtgaagtcccagatggacgacaaagtcttggtgcgcatggaggcgattatc
agttccatgaccctgaaagaacgcgccaatccggacatcattaaaggttcgcgtaaacgc
cgtatcgctgccggttgcggtatgcaagttcaggacgttaaccgtcttctgaaacagttc
gacgacatgcagcgcatgatgaagaaaatgaagaagggcggcatggcgaagatgatgcgc
ggcatgaaagggatgatgccgccaggcttccctggccgctaa
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