Atlantibacter hermannii: NCTC12129_04094
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Entry
NCTC12129_04094 CDS
T05790
Symbol
gcvP_2
Name
(GenBank) glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
ahn
Atlantibacter hermannii
Pathway
ahn00260
Glycine, serine and threonine metabolism
ahn00630
Glyoxylate and dicarboxylate metabolism
ahn00670
One carbon pool by folate
ahn00785
Lipoic acid metabolism
ahn01100
Metabolic pathways
ahn01110
Biosynthesis of secondary metabolites
ahn01200
Carbon metabolism
Module
ahn_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
ahn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NCTC12129_04094 (gcvP_2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NCTC12129_04094 (gcvP_2)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
NCTC12129_04094 (gcvP_2)
00670 One carbon pool by folate
NCTC12129_04094 (gcvP_2)
Enzymes [BR:
ahn01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
NCTC12129_04094 (gcvP_2)
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Motif
Pfam:
GDC-P
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
VDZ74908
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Position
1:complement(3700368..3702854)
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AA seq
828 aa
AA seq
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MTQTLDQLENRDAFIDRHIGPDSEQLHSMLNTVGAESLDALTAQIVPADIQLATPPAIGE
ATTEFAALAELKAIAARNKRFKTFIGMGYAAVHTPPVILRNMLENPGWYTAYTPYQPEVS
QGRLEALLNFQQVTIDLTGMDIASASLLDEATAAAEAMAMAKRVSKLKNANRFFVAADVH
PQTLDVVRTRAETFGFDVIVDDAQKVLDHQDVFGVLLQQVGTTGEVHDYTALIAELKSRK
VVVSVAADLMALVMLTAPGHQGADIVFGSAQRFGVPMGYGGPHAAFFGARDEHKRSMPGR
IIGVSKDAAGNTALRMAMQTREQHIRREKANSNICTSQVLLANIASLYAVYHGPKGLKRI
ADRIHRMTDILAAGLQQKGLKLRHSSWFDTLCVEIADKAAVLSRAEASEINLRSDVLNAV
GITLDETTTRQDLLNLFSVLLGDDHGLDISELDKDVAHDSRSIPDAMLRQDAILTHPVFN
RYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPVD
QAEGYHQMIAQLSEWLVKLTGYDALCMQPNSGAQGEYAGLLAIRHYHESRNEGHRDICLI
PASAHGTNPASAQMAGMQVVVVACDKQGNIDLADLRVKAEQAGDRLSCIMVTYPSTHGVY
EETIREVCNVVHQFGGQVYLDGANMNAQVGITTPGYIGADVSHLNLHKTFCIPHGGGGPG
MGPIGVKAHLAPFVPGHSVVQIEGMLTRQGAVSAAPFGSASILPISWMYIRMMGAQGLKR
ASQMAILNANYIATRSEKRLPGAVYRTRWSRGARVHSRYSSAKRADRD
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgacacagactctcgaccagttggaaaatcgcgacgcgtttattgaccgtcatatcgga
ccggacagcgagcagcttcattcgatgctcaataccgttggcgcggaatcccttgatgcc
ctgacggcgcagattgtccctgcggacattcaactggcgacgccgcctgccattggcgag
gcgaccaccgaattcgcggcgctggctgaactgaaagccatcgccgcccgtaataagcgc
ttcaaaacctttatcggcatgggttacgccgcggtccatacgccgccggtgatcctgcgc
aatatgctggaaaatccgggctggtacaccgcgtacaccccgtatcagccggaagtgtct
caggggcgtctcgaagcgctgctgaatttccagcaggtgactatcgacctgacgggtatg
gatatcgcctcggcttccctgctggacgaagcgaccgcggcggcggaagcgatggcgatg
gccaaacgcgtcagcaaactgaagaacgcaaaccgcttcttcgtggcggctgacgtgcat
ccgcaaaccctcgacgtggtacgtacccgtgcggaaacctttggttttgacgttatcgtc
gatgacgcgcaaaaagtgctcgaccatcaggacgtgttcggtgtgctgttacaacaggtg
ggcaccaccggcgaagttcatgattacaccgcgctgatcgccgagctgaaatcgcgcaaa
gtggtcgtcagcgtcgcagccgatcttatggcgctggtgatgctgaccgcgccggggcac
cagggggccgatatcgtgttcggttctgcccagcgcttcggcgtaccgatgggctacggc
ggcccgcacgcggccttcttcggcgcgcgcgatgagcataaacgctcaatgcctggccgt
attatcggcgtctccaaagacgcggcgggcaacacggcgctgcgtatggcgatgcaaacc
cgcgagcagcatatccgccgtgaaaaagccaactccaacatctgtacctctcaggtactg
ctggcaaacatcgccagcctgtatgccgtttatcatggcccgaaaggcctgaagcgtatc
gctgatcgcatccaccgtatgaccgatattctggcggcaggcctacagcaaaaaggcctg
aaactgcgccacagtagctggttcgataccctgtgcgtggaaatcgccgataaagcggct
gtgttgtcccgcgctgaagccagcgaaattaacctgcgcagcgacgtgctgaatgctgtg
ggcatcacgctggatgaaaccaccacccgtcaggatctgcttaacctgtttagcgtgctg
ctgggcgatgaccacgggctggatatcagcgaactggataaagacgtggcgcatgacagc
cgttcgatcccggacgcgatgctgcgccaggatgcgatcctcacgcacccggtatttaat
cgctatcacagcgaaaccgaaatgatgcgttatatgcattcgctggagcgcaaagatttg
gcgttaaaccaggcgatgatcccgctcggttcctgcaccatgaagctcaatgcggcggcg
gaaatgatccctattacctggccggagtttgctgagcttcatccgttctgcccggtggat
caggcggaagggtatcatcagatgatcgcccagctctccgaatggctggttaagctgacc
ggctacgatgcgctgtgtatgcaaccaaactccggcgcgcagggcgaatacgccgggctg
ctggcgatccgtcactatcacgagagccgcaacgaaggccatcgcgatatctgcctgatc
ccggcgtctgctcacggcactaacccggcctctgcgcaaatggcagggatgcaggttgtc
gtcgtggcatgcgacaagcagggcaacatcgatcttgccgatctgcgcgtcaaagccgaa
caggcgggcgatcgtctgtcgtgcatcatggtgacctatccgtccacccacggcgtatac
gaagaaactatccgcgaagtgtgcaacgtggtgcatcagtttggcggccaggtttacctc
gacggtgcgaatatgaatgcccaggtgggcatcaccacgccgggttatatcggcgcggat
gtgtcgcacctcaacctgcataaaaccttctgtattccacacggcggcggcggtccgggc
atggggccgattggcgtgaaagcgcacctggcaccgtttgtaccgggccacagcgtggtg
cagattgaaggtatgctgacccgtcagggcgcggtttctgccgcaccgttcggcagcgcg
tcgattctgccaatcagctggatgtatatccgcatgatgggcgcgcaggggcttaaacgc
gccagccagatggcgatcctcaacgccaactacatcgccacccggtctgaaaagcgcctt
cccggtgctgtataccggacgcgatggtcgcgtggcgcacgagtgcattctcgatattcg
tccgctaaaagagcagaccgggattag
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