KEGG   Atlantibacter hermannii: NCTC12129_04537
Entry
NCTC12129_04537   CDS       T05790                                 
Name
(GenBank) putative type VI secretion protein
  KO
K11900  type VI secretion system protein ImpC
Organism
ahn  Atlantibacter hermannii
Brite
KEGG Orthology (KO) [BR:ahn00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ahn02044]
    NCTC12129_04537
Secretion system [BR:ahn02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   NCTC12129_04537
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: VDZ75334
LinkDB
Position
1:complement(4099802..4101343)
AA seq 513 aa
MSVQNSTSQTGETLVREHAEASGVYASLFEKINLTPVAALGDIDTWQDSQALADATADER
VTAAVQVLLQRLKKSGQQVEKLDKSLLDHHIAELDYQISRQLDEVMHHQEFQKVESQWRG
LKHLIDRTDFRQNVKIEILDISKDDLRQDFEDAPEITQSGLYGHTYIAEYDTPGGEPIGA
VISSYEFDASPQDIALLRNISKVAAAAHMPFIGSVGPAFFLKNSMEDVAAIKDIGNYFDR
AEYIKWKSFRDTDDSRYIGLTMPRVLGRLPYGPDTVPVRSFNYIEEVKGPDHEKYLWTNA
SFAFAANMVRSFINNGWCVQIRGPQAGGAVQDLPIHLYDLGTGNQVKIPSEVMIPETREF
EFANLGFIPLSYYKNRDYACFFSANSTQKPALYDTADATANSRINARLPYIFLLSRIAHY
LKLIQRENIGTTKDRRLLELELNTWVRGLVTEMTDPGDELQASHPLRDAKVVVEDIEDNP
GFFRVKLYAIPHFQVEGMDVNLSLVSQMPKAKA
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtctgtacagaattctacttcacaaaccggcgaaaccctggtccgggagcatgctgaa
gcgtcaggtgtttacgcttctttatttgaaaaaatcaatctcacacccgtcgctgcgtta
ggcgatatcgatacctggcaggacagccaggctctcgcagacgccaccgccgatgagcgt
gtgacggcggcggttcaggtcctgttacagcgcctgaaaaaatctggtcagcaggtcgag
aaactcgataaatccctccttgatcatcacattgccgaactggattaccagatcagtcgt
caactggacgaggtcatgcatcatcaggaatttcagaaagtggaatcccagtggcgcggc
cttaagcatctgattgatcgcaccgattttcgtcagaacgtcaaaattgaaatccttgat
atttctaaagacgatctgcgccaggattttgaggacgctccggaaattacgcagagcggc
ctttatgggcacacttatattgcggagtacgacactcccggcggcgaaccgattggtgcc
gtgatttcgtcatatgagtttgacgccagcccgcaggatatcgcgctgctgcgtaatatt
tctaaagtcgccgctgccgcgcatatgccgtttatcggctccgtcggcccggctttcttc
ctgaaaaactcaatggaagacgtggcggccattaaggatatcggcaactactttgatcgt
gccgaatacatcaagtggaaatccttccgggatacggatgactctcgctatatcgggctc
acgatgcctcgcgtgcttgggcgtttgccttacgggccagatacggttccggtgcgcagc
ttcaattacattgaagaagtaaaagggcccgatcacgagaagtatctctggaccaatgcg
tcattcgcctttgcggcgaatatggttcgcagctttattaataacggatggtgcgtgcaa
attcgcggcccgcaggcgggtggcgcggttcaggatctgccgatccatctttacgatttg
ggcaccggcaaccaggtaaaaatcccgtcggaggtcatgatcccggaaacgcgtgagttc
gagttcgctaatctgggcttcattccgctctcttactataaaaaccgtgactacgcgtgc
ttcttctcggcgaattccactcagaaacccgccctgtacgacaccgcggacgccactgct
aacagccgcattaatgcgcgtctgccttacatcttcctgttatcacgcattgctcattat
ctgaagctgatccagcgggaaaacatcggcactaccaaagatcgccgactgctggagctg
gagctgaatacctgggtacgtggtttggtcacggaaatgaccgatccgggcgatgaactg
caggcttcccacccgttacgtgatgcgaaggtggtggttgaagatattgaagataacccg
ggcttcttccgcgtgaaactctatgccatcccgcatttccaggtcgaaggcatggatgtc
aacctgtcgctggtctcgcagatgccgaaggcgaaagcgtaa

DBGET integrated database retrieval system