Atlantibacter hermannii: NCTC12129_04706
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Entry
NCTC12129_04706 CDS
T05790
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
ahn
Atlantibacter hermannii
Pathway
ahn00071
Fatty acid degradation
ahn00280
Valine, leucine and isoleucine degradation
ahn00310
Lysine degradation
ahn00362
Benzoate degradation
ahn00380
Tryptophan metabolism
ahn00410
beta-Alanine metabolism
ahn00640
Propanoate metabolism
ahn00650
Butanoate metabolism
ahn00907
Pinene, camphor and geraniol degradation
ahn00930
Caprolactam degradation
ahn01100
Metabolic pathways
ahn01110
Biosynthesis of secondary metabolites
ahn01120
Microbial metabolism in diverse environments
ahn01200
Carbon metabolism
ahn01212
Fatty acid metabolism
Module
ahn_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
ahn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
NCTC12129_04706 (fadB)
00650 Butanoate metabolism
NCTC12129_04706 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
NCTC12129_04706 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
NCTC12129_04706 (fadB)
00310 Lysine degradation
NCTC12129_04706 (fadB)
00380 Tryptophan metabolism
NCTC12129_04706 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
NCTC12129_04706 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
NCTC12129_04706 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
NCTC12129_04706 (fadB)
00930 Caprolactam degradation
NCTC12129_04706 (fadB)
Enzymes [BR:
ahn01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
NCTC12129_04706 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
NCTC12129_04706 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
NCTC12129_04706 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
NCTC12129_04706 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
GpA_nuclease
CetZ_C
Motif
Other DBs
NCBI-ProteinID:
VDZ75483
LinkDB
All DBs
Position
1:4263706..4265895
Genome browser
AA seq
729 aa
AA seq
DB search
MLYKGDTLYVNWLEDGIAELVFDAPGSVNKLDTATVASLGHALDVLEKQSELKGLLLRSE
KAAFIVGADITEFLSLFLVPQEQLSQWLHFANSVFNRLEDLPVPTLSAVNGYALGGGCEC
VLATDYRVATPDLRIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIAAGKDVGADQALS
IGLVDAVVKPEKLVEGALSVLRQAIKGELDWKAKRAPKLEPLHLSKIEATMSFTIAKGMV
MQTAGKHYPAPITAVKTIEAAATLGREEALKLENQSFVPLAHTPQARALVGIFLNDQYVK
SLAKKQSGTVETPKQAAVLGAGIMGGGIAYQSAWKGVPVIMKDINDKSLTLGMTEAAKLL
NKQLERGKINGLKMAGVISTIHPTLDYAGFERVDVVVEAVVENPKVKKAVLAETEDKIRP
DTVLASNTSTIPISELASALKRPENFCGMHFFNPVHRMPLVEVIRGEKTSDDTIAKVVAW
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRQIDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAAGFPQRMAKDYRDAIDALFEAGRYGQKNGLGFWRYKEDSKGKP
RKEQDEAVESLLADVSQTKREFSDEEIIARMMIPMVNEVVRCLEEGVIASPAEADMALVY
GLGFPPFHGGAFRWLDTLGSAKYLDMAQQYEHLGPLYAVPDGLRAKARLNEPYYPPVEPA
RPVGDLKTA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctctacaaaggcgacaccctttacgttaactggctggaagacggcatcgccgaactg
gtgttcgatgcccccggctcagtcaacaaacttgataccgcgacggttgcaagccttggc
cacgcgctggatgtattagaaaaacaaagcgaactcaaaggcctgctgctgcgttcagaa
aaagcggcattcattgttggcgcggatatcaccgaattcctttctctgttcctggtgccc
caggaacagcttagccagtggttacatttcgcgaacagcgtctttaatcgtctggaagat
ttgccggtaccgaccctgtccgccgttaatggctatgcgctgggcggcggctgcgaatgt
gtgttagccactgactaccgtgttgccacgccagacctgcgcatcggcctgccggaaacc
aaactggggattatgccaggattcggcggctcggtacgcctgcctcgcctgctcggcgcg
gacagcgcgctggaaattattgctgcgggtaaagacgtgggcgcagaccaggcgctgagc
atcggtcttgttgatgctgttgttaaacctgagaaactggtcgaaggcgcattaagcgtc
ttgcgccaggccattaagggtgagctggactggaaagcgaagcgtgcgccgaaactggag
ccgctgcacttaagcaaaattgaagccaccatgagcttcaccatcgccaaaggcatggtg
atgcaaactgcgggcaaacactatcccgcgccgatcacggcagtgaaaaccatcgaagcc
gccgccacgctgggccgggaagaagcactgaagttagaaaaccagagtttcgttccgctg
gcgcacacgccgcaggcgcgtgccctggtgggcattttcctcaacgatcaatatgtaaaa
tcgctggcgaaaaagcagtccggaacggttgagaccccaaaacaggctgcagtactgggt
gcagggatcatgggtggcggtatcgcctatcagtccgcctggaaaggcgtgccggtgatc
atgaaagacattaacgataaatcgttaaccctgggcatgaccgaagcggccaaactgctg
aataaacaacttgagcgcggcaagatcaatggcctgaaaatggctggcgtgatttccact
attcacccgacgctcgactacgcaggctttgaacgcgtggatgtggtggtcgaagcggtg
gtcgaaaacccgaaagtcaaaaaagccgtactggcagagacggaagataaaatccgcccg
gataccgtacttgcatccaatacttcaaccattccaattagcgaactcgccagcgcactg
aagcgcccggagaatttctgcgggatgcatttctttaacccggtgcaccgtatgccgctg
gttgaagtgatccgcggcgagaaaacctcagacgataccattgccaaagttgtggcgtgg
gccagcaaaatgggcaaaaccccaattgtggtcaacgactgccctggtttcttcgttaac
cgcgtgctgttcccttacttcgccggttttagccagctcctgcgcgacggcgcagacttc
cgtcaaatcgataaagtgatggaaaaacagttcggctggccaatgggcccggcttatctg
cttgatgtcgtcggtattgataccgcgcatcatgcccaggcagtcatggcggcgggcttc
ccgcagcggatggcgaaagattatcgcgacgccattgacgcgctgttcgaggccggtcgt
tacggccagaaaaatggtctgggtttctggcgttataaagaagacagcaaaggcaaaccg
cgtaaagagcaggatgaagccgtagaaagcctgctggcggacgttagccagacgaaacgc
gaattcagcgacgaagaaattattgcccgcatgatgatcccgatggtcaacgaagtggtg
cgttgtctggaagaaggcgttatcgcaagccccgcggaagccgatatggcgctagtgtac
gggctgggtttccctccgttccacggcggcgcgttccgctggctggatacgctcggcagc
gccaaatatctggacatggctcagcaatacgaacacctcggtccgttgtatgcggtgccg
gacggtttgcgcgccaaagcgcggcttaacgaaccgtattatcccccggttgaacccgct
cgcccggttggcgatttgaaaacggcttaa
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