Atlantibacter hermannii: NCTC12129_04729
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Entry
NCTC12129_04729 CDS
T05790
Symbol
recQ_1
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ahn
Atlantibacter hermannii
Pathway
ahn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC12129_04729 (recQ_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahn03019
]
NCTC12129_04729 (recQ_1)
03400 DNA repair and recombination proteins [BR:
ahn03400
]
NCTC12129_04729 (recQ_1)
Enzymes [BR:
ahn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC12129_04729 (recQ_1)
Messenger RNA biogenesis [BR:
ahn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC12129_04729 (recQ_1)
DNA repair and recombination proteins [BR:
ahn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCTC12129_04729 (recQ_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
Helicase_C
RecQ_Zn_bind
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
VDZ75506
UniProt:
A0A447LUU7
LinkDB
All DBs
Position
1:complement(4287254..4288552)
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AA seq
432 aa
AA seq
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MALTATADETTRRDIVNLLGLHDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQDQRGK
SGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLENDVRANVQEKFQRDDLQIVVATVAFG
MGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPP
GQLQDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGLLDAR
KALSTIGRVNQRFGMGYVVEVLRGANNQRIRDMGHDKLPVYGIGKDQSHEHWVSIIRQLI
HMGFATQNIAQHSALQLTEAARPVLRGEVALKLAVPRVIALKPRMAQKSYGGNYDRKLFA
KLRKLRKAIADEENIPPYVVFNDATLIEMAEQMPLSAGEMLGINGVGTRKLERFGKEFMA
LIRSHADGDDEE
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggcgttaaccgccacagcggatgaaaccacgcgccgcgatattgttaacctgctgggt
ctgcacgatccgctgatccaaatcagcagttttgaccgcccgaatattcgctacatgctg
atggagaagttcaaaccgctcgatcagctgatgcgttatgttcaggaccagcgcggtaaa
tccggcattatctactgcaacagccgggcgaaggtggaagacactgccgcccgtctacaa
agccgggggatcagcgccgcggcctatcacgctggcctggaaaacgacgtgcgcgctaac
gtgcaggaaaaattccagcgcgacgatctgcaaatcgtggtggccacggtcgcgttcggt
atgggcattaacaaaccgaacgtgcgtttcgtggtgcacttcgacatcccacgcaatatc
gaatcatactaccaggaaaccggccgtgccggacgtgacgggctgcctgccgaagcgatg
ctgttttacgatccggcggacatggcctggctgcgtcgctgcctcgaagaaaaaccgccc
gggcaactccaggatattgagcgccataagctcaatgctatgggcgcgtttgccgaggcg
caaacctgccgccgtctggtgctgctgaattatttcggcgaaggacgtcaggagccgtgc
ggcaactgcgatatctgcctcgacccgcctaagcagtacgacggtctgctggatgcgcgt
aaggcgctttcaacgattggacgcgttaatcagcggttcgggatgggctacgttgtggaa
gtactgcgcggcgcgaataaccaacgtatccgcgatatggggcatgacaaactgcccgtt
tacggcattggtaaagaccagagtcacgagcactgggtaagcattattcgccagctcatt
catatgggattcgccacacaaaacattgctcagcattccgcgcttcagcttaccgaagcg
gcgcgccccgttctgcgcggtgaagtggcgttgaagcttgccgttccacgcgttatcgcc
ctgaaaccccgcatggcgcagaaatcgtacggtggaaattatgaccgtaaactgttcgcc
aagctgcgtaagctgcgcaaagccattgcggacgaagagaatattccgccttacgtggtg
ttcaatgacgcgacgctgattgaaatggcagagcaaatgccgctttccgccggtgaaatg
ttgggcattaacggcgtaggcacccgtaagcttgagcgcttcggaaaagagtttatggcg
ttgattcgtagccatgcggatggcgatgacgaagagtag
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