Atlantibacter hermannii: NCTC12129_04878
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Entry
NCTC12129_04878 CDS
T05790
Symbol
rfaF
Name
(GenBank) ADP-heptose--LPS-heptosyltransferase II
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
ahn
Atlantibacter hermannii
Pathway
ahn00540
Lipopolysaccharide biosynthesis
ahn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ahn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
NCTC12129_04878 (rfaF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ahn01005
]
NCTC12129_04878 (rfaF)
Enzymes [BR:
ahn01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
NCTC12129_04878 (rfaF)
Lipopolysaccharide biosynthesis proteins [BR:
ahn01005
]
Core region
NCTC12129_04878 (rfaF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
PAP_NTPase
Motif
Other DBs
NCBI-ProteinID:
VDZ75640
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All DBs
Position
1:4419379..4420425
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AA seq
348 aa
AA seq
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MKILVIGPSWVGDMMMSQSLYRTLKARYPQAVIDVMAPAWCRPLLSRMPEVNEAIPMPLG
HGALKLGERRKLGLSLRDKRYDRAWVLPNSFKSALVPFFAGIPHRTGWRGEMRYGLLNDV
RVLDKQAWPLMVERYVALAYDKGVMRSAKDLPQPLLWPQLQVSEGEKSHTCRAFSLSSER
PMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGHQIVLFGSAKDHEAGNEILAALNTEQQ
AWCRNLAGETQLEQAVILLAACKAVVTNDSGLMHVAAALNRPLVALYGPSSPDFTPPLSH
KARVIRLITGYHKVRKGDAAEGYHQSLIDITPQQVLDELNALLLQEEA
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatactggtgattggcccgtcatgggtgggcgacatgatgatgtcgcaaagtctt
tatcgcacgctcaaggcgcgctatccccaggcagtcatcgacgtgatggcgcccgcgtgg
tgccgtccgttgctgtctcgtatgcccgaagtcaacgaagcgatcccgatgccgcttggt
cacggtgcgctgaagctgggcgaacgacgtaaactgggccttagcctgcgtgataaacgc
tatgaccgcgcctgggtgctgccgaattcgtttaaatccgctcttgtgccttttttcgcg
ggtataccgcatcgcaccggctggcgtggagaaatgcgctacgggctgcttaatgacgtc
cgcgtgttagataaacaagcctggccgttaatggtggagcgctatgtggcgctggcgtat
gacaaaggtgtgatgcgttcagcgaaagatctgccccaaccgctcctgtggccacaactt
caggtgagtgaaggcgagaaatcgcatacctgccgcgcattttccctctcttctgaacgt
ccgatgattggattttgtccgggtgcggaattcggcccggcaaaacgctggccgcattat
cattatgcagagctggcaaaacagcttatcgacgaaggccatcagattgtgctgtttggc
tccgctaaagatcatgaagccggaaatgaaatactggcggcgctcaatacggaacaacag
gcatggtgccggaatctggcaggcgaaacgcagctggaacaggccgttatcctgcttgcc
gcgtgtaaagcggtggtcactaacgactcgggtctgatgcacgtcgccgcggcattaaac
cgacctctggtggcgttgtatggccccagcagcccggactttaccccgcccctgtcccac
aaagcccgcgtgatccgcctgattaccggttatcacaaggtgcgtaaaggcgatgcggct
gaaggttatcatcagagcctgatcgacatcacgccgcaacaggtgcttgatgagctcaat
gccctgttattgcaagaggaagcctga
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