Acidianus hospitalis: Ahos_1207
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Entry
Ahos_1207 CDS
T01493
Name
(GenBank) XPD repair helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
aho
Acidianus hospitalis
Pathway
aho03022
Basal transcription factors
aho03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aho00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Ahos_1207
09124 Replication and repair
03420 Nucleotide excision repair
Ahos_1207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aho03021
]
Ahos_1207
03036 Chromosome and associated proteins [BR:
aho03036
]
Ahos_1207
03400 DNA repair and recombination proteins [BR:
aho03400
]
Ahos_1207
Enzymes [BR:
aho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Ahos_1207
Transcription machinery [BR:
aho03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Ahos_1207
Chromosome and associated proteins [BR:
aho03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Ahos_1207
DNA repair and recombination proteins [BR:
aho03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Ahos_1207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
ResIII
XPD_arch
DUF7675
Motif
Other DBs
NCBI-ProteinID:
AEE94090
UniProt:
F4B3Q3
LinkDB
All DBs
Position
complement(1096917..1098482)
Genome browser
AA seq
521 aa
AA seq
DB search
MKRGFLVALNSPTGSGKTLFSLVVGTELKGKVAYIVRTHNEYYPVYRESKRLEKSFSFLV
SKALACPFSTADVNPEDIKCSSCDIFSSIPIKVDDYPFSFLSKLKKEGEEEGFCPYYSLL
DSLSNSDVIVLTYPYFFIPRLREALGLDFSQYVVVVDEAHNLDRLNELEERKLNITIIDR
AISQISNTTVIEILRRLKEEVKKKALSEEKYILVQDYPKLTDNELEIIKEEYEALREKMI
KEKRIKQIYLNNIIKFYETEGKVFSYKGSLVKKPITPEKYISILNDPSLSVILMSGTLQS
KEFLRNVLGITRQIEYIDTEKEMKKKLSGTIDCILALDVTSAYSLRTKEMWKKYASYILK
IFYQAKGYVLAVFPSYSLMNEVMKLVNLPKLVEDEKTSLEDVYKLKEKSIIAAVARGKLS
EGIELTKDGKSLISDVVLVGIPYPAVDDYLKLQAEEISKITGQDVKDLLINTTALIAVKQ
AIGRAIRSVNDRANVWLLDKRYDSIMWKTKINCLNPKKIKL
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaagaggatttttagttgctttaaactctcccactggtagtggtaaaacgctgttt
tctttagtagttggtaccgaacttaagggtaaggtagcttacattgtaagaacgcataat
gagtattacccagtatatagagaaagcaaaaggctagagaagagtttttcatttctagta
agtaaagcacttgcttgtccattttctactgctgatgtaaatccagaagatataaaatgc
tctagttgtgacatattttctagtattccaataaaggtcgatgattatcctttttctttt
ctttcaaagttaaagaaagagggagaagaggagggattttgcccatattattcattacta
gattctttatctaattctgacgtaatagttctgacttacccatattttttcatacctaga
ttgagagaagcattaggattagatttttcacaatatgttgtagtagtagacgaagctcat
aatttagatagattaaatgagcttgaagaaagaaaactaaatataacaataattgataga
gcaatttctcagatttcaaatactactgtaatagagatattaagaagattaaaagaagaa
gttaagaagaaagcgttatctgaggaaaaatatattctagtacaagactatcctaagctt
acagataatgagctagaaataataaaagaagagtacgaagctttaagagaaaaaatgata
aaagaaaagcgaataaaacagatttatttgaataatataataaaattctatgaaactgaa
gggaaagtgttctcctacaaagggagtctagtaaaaaagcctataacaccagaaaaatac
atttcaatacttaatgatccgagtctttcagtaattttaatgtctggaactttacaatca
aaagaattcttacgtaatgtactcgggataactaggcagatagaatatatcgatactgaa
aaagaaatgaagaaaaaactaagtggcactatagattgcattctggctcttgatgtaacc
tctgcttatagtttaagaactaaagagatgtggaagaagtacgcttcgtatattttaaaa
atattttaccaagcgaaaggctatgtattagccgtattccctagttattcattaatgaat
gaagttatgaagctagttaatttgccaaagcttgttgaagatgagaaaacaagtctagag
gatgtatataaactgaaagagaagtctattattgctgcagtagcaagaggtaagctttct
gaaggaattgaacttactaaggacggtaaaagtttaatttcagacgtagtactagtagga
ataccttatcctgcagtagacgattaccttaaattgcaagcagaggaaatttcaaaaatt
acagggcaggacgttaaggatttgcttataaatactacagcacttatagctgtgaagcaa
gcaattggtagggcaattagaagtgtaaatgatagggcaaatgtttggttattggataaa
agatacgatagcataatgtggaaaactaagattaattgtttaaatcccaaaaagattaag
ctataa
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