Acidianus hospitalis: Ahos_1417
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Entry
Ahos_1417 CDS
T01493
Name
(GenBank) archaeal RNA splicing ligase
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
aho
Acidianus hospitalis
Brite
KEGG Orthology (KO) [BR:
aho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aho03016
]
Ahos_1417
Enzymes [BR:
aho01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
Ahos_1417
Transfer RNA biogenesis [BR:
aho03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
Ahos_1417
Prokaryotic type
tRNA splicing ligases
Ahos_1417
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AEE94300
UniProt:
F4B4S0
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All DBs
Position
1279663..1281102
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AA seq
479 aa
AA seq
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MVDVKRVNTYEWRIEKSGCMRVPVTIFADDVLIDKMKQDLTLKQATNVACLPGVQEGVYV
LPDGHQGYGFPIGGIAATAIDEGGVVSPGGIGYDINCGVRLLRTNLDYEDVKPKLKDLVE
ELHRNVPSGVGSEGKVKLSTQQLDEVLAEGVKWAIDKGYGWAEDMEHIEQHGSWDIADPS
KVSDIAKKRGASQLGTLGAGNHFLEVQVVDKIYDEKIAKALGITHEGQVMVMVHTGSRGL
GHQIASDYLQIMERAMKKYNITVPDRELAAIPFESREGQDYFHAMVSGANFAWTNRQLIT
HWVRESFGNVFKVDPEKLDLHIIYDVAHNIAKIEEYDVEGKRKKLLVHRKGATRAFPPGS
PEIPADHRNIGQVVLIPGSMGTASYVMAGIPEGRRTWYTAPHGAGRWMSREAAVRSYPAN
TVVENLEERGIIVRATTRRVVAEEAPGAYKDVDRVAKVADAVKIAKLVVRLRPIGVTKG
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggttgacgtaaaaagagtcaatacttacgagtggcgaatagaaaaaagcggttgcatg
agagtccctgttactatatttgctgacgacgttttaatagataaaatgaaacaggattta
accttaaaacaagcaacaaacgtcgcttgcttacctggtgttcaagaaggagtttatgta
cttccagatgggcatcaaggatacggatttccaataggtggaattgcagctacggcaatt
gatgaaggaggagtggtgagcccaggaggaataggttatgatattaattgtggagtaaga
ttacttagaacaaatttagattatgaagacgtaaaacctaaattaaaagatctagtagag
gagctccatagaaatgttcctagtggagttggtagtgaaggtaaagtaaaattatcaact
cagcaattagatgaagtccttgcagaaggagtaaagtgggctatagataaggggtacgga
tgggctgaagatatggaacatatagaacaacacggtagttgggatattgcagatccatct
aaagtaagtgatatagctaagaaaagaggagcctcgcaattaggcacattaggtgctggc
aatcacttcttagaagtccaagttgttgataagatttatgatgagaagatagctaaagct
ctagggataacgcatgaaggacaagtaatggtaatggtgcatactggatctagggggcta
ggccatcagattgcgagcgattatttacagataatggaaagagctatgaaaaaatacaat
attacagttccagatagagaactagcggcaattccgtttgagagcagagaaggccaagat
tatttccatgctatggtttctggagcaaatttcgcgtggactaataggcagttgataact
cattgggttagagaaagcttcggaaacgtatttaaggtcgatcctgaaaaattagaccta
catattatttatgatgttgctcataacatagctaagattgaagaatacgacgtagaagga
aaaaggaaaaagttgctagttcacaggaaaggtgcaactagagccttcccgcctggtagt
cctgagattccagcagatcatagaaatattggacaagtagttcttataccaggtagcatg
ggtacagcaagttacgttatggctggaattccagaaggaaggagaacgtggtatactgca
cctcatggtgcaggtagatggatgtctagagaagctgctgtaaggagttaccctgctaat
acagttgtcgaaaacttagaagaaagaggaataattgtaagagctacgaccagaagggtt
gttgcagaagaagcgccgggagcttacaaagatgtagatagagtggcaaaagttgcagat
gcagttaaaatagcaaaattagttgtaagattaaggccaataggcgtgaccaaaggatga
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