Aeromonas hydrophila pc104A: V429_01755
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Entry
V429_01755 CDS
T03193
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ahp
Aeromonas hydrophila pc104A
Pathway
ahp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ahp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
V429_01755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ahp03021
]
V429_01755
03400 DNA repair and recombination proteins [BR:
ahp03400
]
V429_01755
Enzymes [BR:
ahp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
V429_01755
Transcription machinery [BR:
ahp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
V429_01755
DNA repair and recombination proteins [BR:
ahp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
V429_01755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
AHX67644
LinkDB
All DBs
Position
365072..366061
Genome browser
AA seq
329 aa
AA seq
DB search
MLGSVTDFLKPRLVDIEQVSPTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSSKEGVQEDILEILLNLKGIAVKLEGKDEVTLSLTKSGTGPVTAGDITHGDE
VEIVNPEHVICHLTGANAEISMRLKVQRGRGYVPASARVHNDDEERPIGRLLLDSAFSPI
VRIAYNVEAARVEQRTDLDKLVIDMETNGTLDPEEAIRRSATILAEQLEAFVDLRDVSVP
EKKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgctgggttctgtaacagattttcttaaaccgcggctagttgacatcgagcaagttagc
ccgactcatgcgaaagtgactctcgagccacttgagcgtggctttggtcacacgctgggt
aatgccctgcgtcgtattttgctgtcttctatgcccggttgtgcagttactgaagtcgaa
attgacggggtactgcatgagtacagcagcaaagaaggtgtacaggaagacattcttgaa
atcctgctcaacctgaaaggtatcgctgtgaagctggaaggcaaggacgaggtaactctg
tccctgaccaagtctggaacaggccccgttaccgctggtgatatcactcacggtgatgaa
gtcgagatcgtaaacccggagcacgtaatctgccacctgactggtgccaatgctgaaatc
agcatgcgcctgaaagttcagcgcggtcgtggttatgtgcctgcttctgctcgtgttcac
aacgatgatgaagagcgtcctattggtcgcctgctgctggactccgcgttcagccccatc
gttcgtattgcctacaacgttgaggcagcacgtgtggagcagcgtaccgacttggacaag
ctggtcatcgacatggagaccaatggtactctggatcctgaagaagccatccgtcgttct
gccactattctggctgagcaactggaagccttcgtggatctgcgcgatgtcagcgtgccc
gagaagaaagaagagaaacccgagtttgatccgattctgctgcgtcctgtcgatgatttg
gagctgacagttcgttctgcgaactgtctgaaggcagaagctatccactatattggtgat
ctggtacagcgtaccgaagttgagttgcttaagactcctaacctcggtaagaagtccctg
actgagatcaaggacgtgttggcctcccgtggtctgtctcttggcatgcgcctcgagaat
tggccgcccgccagcatcgctgacgagtaa
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