Aeromonas hydrophila pc104A: V429_17865
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Entry
V429_17865 CDS
T03193
Name
(GenBank) mechanosensitive ion channel protein MscS
KO
K22051
miniconductance mechanosensitive channel
Organism
ahp
Aeromonas hydrophila pc104A
Brite
KEGG Orthology (KO) [BR:
ahp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ahp02000
]
V429_17865
Transporters [BR:
ahp02000
]
Other transporters
Pores ion channels [TC:
1
]
V429_17865
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MscS_porin
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Vip3A_N
Motif
Other DBs
NCBI-ProteinID:
AHX70635
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Position
3909608..3912886
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AA seq
1092 aa
AA seq
DB search
MLQRLLCLLLSLTLLTPLAQADDAITQVEELLQSVPKTDTPENQKLRESYQQALQFAREA
QRYREQGKAYQQILIDYPKESARLKESLHNYQPQPRPALSSLKEEALRQAIGLSSNRQLN
LRKERQGVMDSLNQLESTGQEYHLRVDELRKQLQQTRALLDRLSFSSESDRLQDAQQLVT
RLKEQSLSDRIQMLELEQLSAQQRNDLGKLRLQELNLAITDEDEWQTSLLNQQNQLRRDK
TEQALAESERLRKQLTSDMPLLLEQQQQNQALSIQLGALEDQIERVQDEQRVIDKNLSSL
NDLVNSVREQLEWLQISNAYGENLRSKLSDLPAYFPLDKLESAIVNARMAKYQYETEQDA
LKDPRQMRDQLLATDEVALDRAQQAVLDNLLKARRQLLTRLNDASDSLIQEQTRLKLLYS
RQNSKIDEIRELSASHLFWMPDVRPLTPAVLLGVPAALGLALNPINWLQLPQAIAENNPI
TLTFAGIGILVLAWCWFKLARHLTHYSQHIAPRIGKVTQDKFSLTSRLLMRSLLASLPLP
AMVLMVRGLLDGAWQYPFAVAVARGLGEIWFLLLALLMARHLTLEKGILILHFRWQKERV
QKVWSQFRTLLLVIIPSFFVQGMANSYQEHAFYDSLGRLAFIVGALWLLLFFARLNRERL
PLTWGQADMTKPHLLHHFIWNSLMLAPLLAVIGSLLGYFYTSRILLRQLELSLLMGLGCL
LVYYLAHRWMLIQRRRLAFERAKSKRAEILAQRGREEGHDELSSEIPDVVEDTELDLDTI
SAQSLGLVRTLLMLGFTMLVVVQWSELNSAFSFLRSIEVWQVSSKIGGIEQLSAITLQDL
MLTVFTFILTVVTARNLPGLMELTLLQHLSLSPGTGFAITTVTKYIVLVVGALTGFSILG
IDWSKAQWMVAALSLGLGFGLQEIFANFVSGLIILFEKPIRLGDTVTIRELTGTVTKIKT
RATTIVDWDRKEIIVPNKAFITEQFINWSLSDAITRVRLRIRIGLTQEPRKIQTILEESI
RASTLVLETPSPEVFLIEFTDSALIYEIRLYVNSMDHRMPITHEVHSLVLEKLQQQGLGL
PHQQIDIRLSRA
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaacgcctgctctgcctgctgctctctctcactctcctcactccccttgcccag
gccgatgacgccatcacccaggtggaagagctgctgcagagcgtgcccaagacggacacc
ccggaaaaccagaagttgcgggaaagttaccagcaggcactgcagtttgcccgggaggcc
cagcgttatcgcgagcagggcaaggcctatcagcagatcctcatcgactatcccaaggag
tcggcccgcctcaaggagagcctgcacaactaccagccccagcctcgcccggccctctcc
tccctgaaggaggaggcgctgcgccaggccatcggcctgagcagcaaccgccagctcaac
ctgcgcaaggagcgccagggggtgatggacagcctcaaccagctggagagcaccggccag
gagtatcacctgcgggtcgacgagctgcgcaagcagttgcagcagacccgcgccctgctc
gaccggctcagcttcagcagcgaatcggatcgcctgcaggatgcccagcagctggtcacc
cgcctcaaggaacagagcctgtcggaccggatccagatgctggagctggagcagctctcc
gcccagcaacgcaacgatctcggcaagctcaggctgcaggagctcaacctcgccatcacc
gacgaggatgagtggcagaccagcctgctcaaccagcagaaccagctgcgccgcgacaag
accgagcaggcgctggcggagagcgagcggctgcgcaagcagctcacctccgacatgccg
ctgctgctggagcagcaacagcagaaccaggcgctctccatccagctcggcgcgctggag
gatcagatagagcgggtgcaggatgagcaacgggtgatcgacaagaacctgtcgagcctg
aacgacctggtcaactcggtgcgcgagcaattggagtggctgcagatcagcaacgcctac
ggcgagaacctgcgcagcaagctctcggatctgcccgcctacttccccctcgacaagctg
gagtcggccatcgtcaacgcccgcatggccaagtaccagtacgagaccgagcaggacgca
ctcaaggatccgcgccagatgcgcgatcagctgctggccaccgacgaggtggccctcgat
cgcgcccagcaggcggtgctcgacaacctgctcaaggcccgtcgccagttgctgacccgg
ctcaacgacgcctccgacagcctcattcaggagcagacccggctcaagctgctctacagc
cgccagaacagcaagatcgacgagatccgcgagctcagcgccagccacctgttctggatg
ccggacgtgcgcccgctcaccccggccgtgctgctcggggtgccggcggccctcggcctc
gccctcaacccgatcaactggctgcaactgccccaggccatcgccgagaacaaccccatc
accctcaccttcgccggcatcggcatcctggtgctggcctggtgctggttcaaactggct
cgccacctgacccactacagccagcacatagcgccccgtatcggcaaggtgacccaggac
aagttcagcctcaccagccggctgctgatgcgctccctgctcgcctccctgccgctgccc
gccatggtgctgatggtgcgcggcctgctcgacggcgcctggcaatatccgttcgcggtg
gcggtggcccgtggcctcggcgagatctggttcctgctgctggcactcttgatggcccgt
cacctgacgctggagaaggggatcctgatcctccatttccgctggcagaaggagcgggtg
cagaaggtgtggagccagtttcgcaccctcttgctggtgatcatcccgagcttcttcgtg
cagggcatggccaacagctatcaggagcacgccttctacgactccctcggccggctggcc
ttcatcgtcggcgccctctggctgctgctgttcttcgcccgcctcaaccgggagcggcta
ccgctgacctggggccaggccgacatgaccaagccgcacctgctgcaccatttcatctgg
aacagcctgatgctggccccgctgctggcggtgattggctccctactcggctacttctat
acctcccgcatcctgctgcgccagctggagctgagcctgctgatggggctgggctgcctg
ctcgtctattatctggcgcaccgctggatgctgatccagcgtcgccgcctcgccttcgag
cgggccaagagcaagcgggccgagatcctggcccagcgcggccgggaggaggggcacgac
gagctcagttcggagatcccggacgtggtggaagataccgagctggatctggataccatc
agcgcccagtcgctcgggctggtgcgcaccctgctgatgctgggcttcaccatgctggtg
gtggtgcagtggtccgaactcaactcggcgttcagcttcctgcgcagcatcgaggtgtgg
caggtgagcagcaagattggcggcatcgaacagctctccgccatcacattgcaggatctg
atgctgacggtgtttaccttcatcctgaccgtggtcaccgcccgcaacctgccgggcctg
atggagctgaccctgctccagcacctgagcctctcccccggcaccggctttgccatcacc
acggtgaccaagtacatagtgctggtggtgggggcgctgaccggcttctccatcctcggc
atcgactggtccaaggcgcagtggatggtagcggccctctccctgggcctgggtttcgga
ctgcaggagatcttcgccaacttcgtgtcgggcctcatcatcctgttcgagaaaccgatc
cggctcggcgacaccgtcaccattcgcgagctgaccggcaccgtcaccaagatcaagacc
cgtgccaccaccatagtggactgggacaggaaggagatcatcgtccccaacaaggccttc
atcaccgaacagttcatcaactggtcgctgtcagacgccatcacccgggtacggctgcgc
atccgcatcggcctgacccaggagcccagaaagatacagaccattctggaagagtcgatc
agggcctccaccctggtgctggagaccccctcccccgaggtgttcctgatcgaattcacc
gactcggcgctgatctacgagatccggctctatgtgaacagcatggatcaccgcatgccc
atcacccacgaggtccactcgctggtgctggagaaattgcagcaacaggggctggggctg
ccacaccagcagatcgacattcgtctgagccgggcctga
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