Aeromonas hydrophila pc104A: V429_19470
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Entry
V429_19470 CDS
T03193
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ahp
Aeromonas hydrophila pc104A
Brite
KEGG Orthology (KO) [BR:
ahp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ahp03016
]
V429_19470
Enzymes [BR:
ahp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
V429_19470
Transfer RNA biogenesis [BR:
ahp03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
V429_19470
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AHX70925
LinkDB
All DBs
Position
4248086..4248613
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AA seq
175 aa
AA seq
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MAKLFFALPAEALAPDLVAWRDQLPWPGQPVPAANLHLTLAFLGEADQLTTTRLMAAVAR
QHCPPLTIALNETGWFGRAKAAWVGPTEWPNELTVLARALRRHGEKLGLGNGEQGYRPHV
TLSRKASEPPAALPAPDFVLQADRFCLYQSLSTPDGVRYEPLACWPLRAREKMAS
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atggccaaactcttctttgccctgcccgccgaggcgctggcacccgatctcgttgcctgg
cgcgaccagctgccctggccgggtcaaccggtgcccgccgccaatctccacctgacgctg
gcctttctcggcgaagcggatcagctcaccaccacccgcctgatggccgctgttgcgcgc
cagcactgcccgccgctcaccatagcgctcaatgaaaccggctggttcggccgcgccaag
gctgcctgggttggcccgacggagtggcccaacgagctcaccgtgctggccagggcgctg
cgtcgccacggcgagaagctggggcttggcaacggcgagcagggctatcgcccccacgtc
accttgtcgcgcaaggcgagcgaaccgccggccgccttgcccgcccccgatttcgtgctg
caggccgatcgcttctgcctctatcaatccctctccaccccggacggggtgcgctacgag
cccctcgcctgctggccgctgcgggccagagagaaaatggcatcctga
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