Aeromonas hydrophila pc104A: V429_19490
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Entry
V429_19490 CDS
T03193
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ahp
Aeromonas hydrophila pc104A
Pathway
ahp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
V429_19490 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahp03019
]
V429_19490 (pcnB)
Enzymes [BR:
ahp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
V429_19490 (pcnB)
Messenger RNA biogenesis [BR:
ahp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
V429_19490 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
AHX70929
LinkDB
All DBs
Position
4251225..4252724
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AA seq
499 aa
AA seq
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MASRQFEVITRCTIFSQIANFCRKVLGKEDGEQSAESPIPARVAGQRRTLSRDQHPISRK
EISENALKVLYRLNKGGYEAYLVGGGVRDLLLGKTPKDFDIATDATPEQIKSLFSNCRLI
GRRFRLAHIVFGRDVIEVATFRGHHHQVNTSKHVSAQSDEGMLLRDNVYGTIEEDAERRD
FTVNALYYSAKDFTLHDFEGGLEDLAERKLELIGDPETRYREDPVRMLRAVRFAAKLDMT
ISPRTAAPIKELAPLLQDIPAARLFEETLKLFLAGDGLATYKLLREYGLFQQLFPQVAAL
FTPHGNSPYEQFIEQALIDTDTRVREDKRVTPAFLYATLLWGCVEARGRVLENESGLPWY
DAFMLAINEVLDNQVRIIAVPRRFTTDVRDIWALQQRLTRRQGRHPERAMEHPKFRAAFD
FLLLRNRVERGLGELASWWERYVESNPDVRPQLQREATRRPASGERGQAGEARSNDGEKR
SSNSRNRRRPRRRKPKAAE
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
ttggcctcccgtcaatttgaagtcataacgaggtgtaccattttttcccagatcgcaaac
ttttgccgcaaagtgctcggcaaggaagacggcgagcagtcggcggagtcccccattccg
gcccgtgtcgccgggcaacgtcgtaccttgagccgtgaccagcacccgatttcgcgcaaa
gagatcagcgagaatgcactcaaggtgctctatcgcctgaacaagggcggctacgaagcc
tacctggtcggcggcggagtccgggatctgctgctcgggaagacgcccaaggatttcgac
atcgctaccgatgcgacgccggagcagatcaagtcactgttcagcaactgccgcctgatc
ggccgccgtttccggctggcccacatcgtctttggtcgtgacgtgatcgaagtggccacc
ttccgcggtcaccaccatcaggtcaataccagcaaacatgtgtcggcccaatccgatgaa
ggcatgctgctgcgcgacaacgtctacggcaccatcgaagaggatgccgagcgccgcgac
tttaccgtcaacgccctctattacagcgccaaggatttcaccctgcacgatttcgagggc
gggctggaagacttggccgagcgcaagctggagctcattggcgatcccgagacccgctac
cgcgaagatccggtgcggatgctgcgcgccgtgcgcttcgccgccaagctggacatgacc
atcagcccacgcaccgccgcccccatcaaggagctggcgccgctgctgcaggatattccg
gcggcccgcctgttcgaggaaaccctcaagctgttcctggctggcgatggcctggccacc
tacaagctgctgcgcgaatacggcctgttccagcagctgttcccgcaggtggcggcgctg
tttaccccgcacggcaactcgccctacgagcagttcatcgagcaggcgctgatcgatacc
gacacccgggtacgggaagacaagcgcgtcacccccgccttcctctacgccaccctgttg
tggggctgtgtcgaggcccgcggccgggtgctggagaacgagagcggcctgccctggtat
gacgccttcatgctggcgatcaacgaggtgctggacaaccaggtacggatcatcgccgtc
ccgcgccgcttcaccactgatgtgcgcgacatctgggccctgcagcagcggctgacccgc
cgtcagggccgccaccccgagcgagccatggagcatcccaagttccgcgcggcgtttgat
ttcctgttgctgcgcaaccgggtcgagcgcggtctgggcgagctggccagctggtgggag
cgctacgtggaatccaatccggacgtgcgcccgcagctgcaacgggaggcgacccgccgc
ccggcaagcggtgagcgcggtcaggccggtgaggcccgcagcaacgatggcgagaagcgc
agcagcaacagccgcaaccgtcgtcgcccccgtcgccgcaaaccgaaagcggccgagtga
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