Allocoprobacillus halotolerans: NMU03_01600
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Entry
NMU03_01600 CDS
T09839
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
ahq
Allocoprobacillus halotolerans
Brite
KEGG Orthology (KO) [BR:
ahq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahq03019
]
NMU03_01600
03009 Ribosome biogenesis [BR:
ahq03009
]
NMU03_01600
Enzymes [BR:
ahq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NMU03_01600
Messenger RNA biogenesis [BR:
ahq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NMU03_01600
Ribosome biogenesis [BR:
ahq03009
]
Prokaryotic type
rRNA helicases
NMU03_01600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_19
Nucleocapsid-N
Microtub_bd
Mago-bind
Motif
Other DBs
NCBI-ProteinID:
UTY39556
LinkDB
All DBs
Position
complement(264129..265514)
Genome browser
AA seq
461 aa
AA seq
DB search
MKLFEHYQFQSFVKETLQKLHFQEPTKIQKEVIPLVYKHRDVIGISQTGTGKTHAFLIPI
MDMIDTSLDCVQAVITAPTRELAQQIYEQAKIFVEFNKDLRVSLIIGGKDKQKTISKLNV
QPHLVIGTPGRIKDLSLDEQALKITTADIFVIDEADMTLEYGYLEDIDAVLGKMKDNLQM
LVFSATIPQMLRPFLKKYMDAPKIIEIDEHLSTSRNISHYLVPTKHRNRYEVLKSVMKVI
DPYICIIFCNKREEVEKLSYQLREDGYKIGEIHGNLEPRERRQMMRRIQNMDYQYIVATD
IAARGIDIDGVSHIINMEFPSELDFYIHRSGRCGRGKYTGECYNMYDTSNQKIVEELERK
GIHFEVKELKGQQFVQAKEREKRKTRVKHQTELEKKISAIVRKPTKVKPGYKKKRKRQIE
AMVQKEKRAIIKQDIRRQKKERAKQAQREKEKERHNNVEDW
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaaattatttgaacactatcaatttcagtcttttgtaaaagaaacattacaaaagcta
cattttcaagaaccaacaaagattcaaaaagaagtgattccacttgtttataaacatcgt
gatgtgattggtatttcacaaacaggaacagggaaaacacatgcttttttaatacctatt
atggatatgattgacacatctttagattgtgtacaagccgttattactgcaccgacaaga
gaattggcacaacagatttatgaacaagcaaaaatctttgtggagtttaataaagattta
agagtttctttaattattggtgggaaagacaaacaaaaaacgatttctaaattaaacgtt
caacctcatttagtcattggaacaccaggaagaattaaagatttatctttagatgaacag
gctttaaaaattacgacagcagatatatttgtcattgatgaagcagatatgacattagaa
tatggttatttagaagatatagatgccgtactaggaaaaatgaaagacaatttacaaatg
cttgtcttttcagcaactattccacagatgttaagaccatttttaaagaaatatatggat
gcgccaaagattattgaaatcgatgaacatctttctacatcacgtaatatttctcattat
ttagtccctacaaaacatcgtaatcgttatgaggttttgaagagtgttatgaaagtgatt
gatccttatatttgtattattttctgtaataaacgtgaagaagtagaaaaattaagttat
cagttacgtgaagatggatacaagataggagaaattcatgggaatttagagccaagagaa
agacgacagatgatgcgccgtattcaaaatatggattatcaatatattgtcgctacagat
attgcagcaagaggtattgatatagatggtgtcagccatattattaatatggaatttcca
agtgaactagatttttatattcatcgtagtggacgttgtggacgtggaaaatatacgggt
gaatgttataatatgtatgatacatcgaatcaaaagattgttgaagaattggaaagaaaa
gggattcattttgaggttaaggaattaaaaggacaacaatttgtacaagccaaagaacgt
gaaaaacgtaaaacacgtgtgaaacatcaaacagagttagaaaagaagatttcagcgatt
gtcagaaaacctacaaaagtgaaacctggatataagaaaaaacgtaaaagacagattgaa
gcaatggtccaaaaagaaaaacgtgcgattattaaacaagatatcagaagacagaagaaa
gaacgtgcaaaacaagcacaaagagaaaaagagaaagagaggcacaataatgttgaagat
tggtag
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