Allocoprobacillus halotolerans: NMU03_11935
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Entry
NMU03_11935 CDS
T09839
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
ahq
Allocoprobacillus halotolerans
Brite
KEGG Orthology (KO) [BR:
ahq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahq03019
]
NMU03_11935
Messenger RNA biogenesis [BR:
ahq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NMU03_11935
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
tRNA_anti_2
TraI_2
CDC24_OB3
Motif
Other DBs
NCBI-ProteinID:
UTY38370
UniProt:
A0ABY5I332
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All DBs
Position
2063311..2064258
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AA seq
315 aa
AA seq
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MIKIKDMKCGDDNVEFTAMISHITLGKTNGSHKSNYLSITFQDETGTIDAKLWNASQEHI
DSLKAGAVVRAKGDIIKYSDNRQMKIISIDDVSYQHSQQLQFLAKAPIDHDVMMKELKQY
IQRISNTKLYVITKHLFEKNFEKLKVYPAASKNHHEFASGLAFHTLSMLKVADALMTVYP
ELNADLLYAGILLHDIGKTVELSGPVVPTYTFEGQMLGHISIAQSMVYASAQELNIEGEE
VTLLQHMILSHHGKNEYGSPVLPQIREAEMLHMIDNMDARMNMFNKALETLEVGETSKRV
FSLENRTVYKPKMYE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaattaaagatatgaaatgtggtgatgacaatgtggaatttacagctatgatt
tcacatatcactttaggaaaaacaaatggatcacataaaagtaattatttaagtattact
tttcaagatgaaactgggacgatagatgctaaattatggaatgctagtcaagaacatatt
gattcattaaaagccggagcagttgtcagagcaaaaggtgatatcattaaatacagtgat
aatcgtcaaatgaagattatctcaattgatgatgtttcctatcaacattcacaacaactt
caatttttagcgaaagctccaattgatcatgatgtgatgatgaaagaactcaaacaatat
attcaacgtatatccaatacaaaactttatgttattacaaaacatttatttgaaaaaaac
tttgagaaattaaaagtttatccagctgctagtaaaaatcatcatgaatttgcatcagga
ttagcttttcataccttatctatgttgaaggtagcagatgctttaatgacagtctatcca
gagctaaatgctgatttattatatgctggtatcttacttcatgatataggaaagacagta
gaattaagtggtcctgttgttccaacatatacttttgaaggacaaatgctaggacatatt
tcgattgcacaatccatggtctatgcctcagcacaagagttaaatattgaaggtgaagaa
gtcactttattacagcatatgattttatctcatcatggtaaaaatgaatacggttcacct
gttttgccacagattagagaagctgaaatgttgcatatgattgataatatggatgcaaga
atgaatatgtttaataaagctttagaaacattggaagttggtgaaacttcaaaacgtgtt
ttctcacttgaaaatagaacagtttataaacctaaaatgtatgaataa
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