KEGG   Allocoprobacillus halotolerans: NMU03_14470
Entry
NMU03_14470       CDS       T09839                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
ahq  Allocoprobacillus halotolerans
Pathway
ahq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ahq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NMU03_14470
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ahq03019]
    NMU03_14470
Messenger RNA biogenesis [BR:ahq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     NMU03_14470
SSDB
Motif
Pfam: RNase_J_C RNase_J_b_CASP Lactamase_B_2 Lactamase_B RMMBL
Other DBs
NCBI-ProteinID: UTY38784
UniProt: A0ABY5I0F0
LinkDB
Position
complement(2481643..2483337)
AA seq 564 aa
MKNDVIKLIPMGGQAEMGKSMYCFEINDKIFIIDSGFRFPDSDKLGVDIIIPSFTYLEER
ADQVAAIIITHGHDDAMAALPYLLQTIHAPVYAPKLTALLIKQMVERFQRHNRVKINLDL
HPVNRNASIDIEGVPVEFFPVTHSIPGSVGVALWTSYGYLVYSGEFIIDFGAPKEFQCDI
QKMMEIGKKGVLALLVESSGAKHDGYTSPNHKLTNKIDHIFEDSYERIIISSYAQNVFRT
QEIIELTKKYKRQIVFYGRDKYDNTNTLLRIAQRSKKPVLNVPEHLLGDKEKIGNPQYDS
NYVILLSGSPQRIYHDICDIIDGGDDLLKLRKGDTFIVASPVLPGTEKIANKAHNGLYKT
DAHVHLLKNKDLFSMHASKEDIKVIIQIFKPQYYIPMKGEYQHFIFNQQIAQDMDIPNDH
IIIIDNGERITFEKGKLLDTRDVFEIDDVMIDGIGIGDVGEKVIDDRIQLANDGVVIVGL
TISRETKEIVAQTDCQTRGFVYLKDSEYVIKHVIEICEKVVGQLKENPEMEIAEIRSMMK
DQSMKYIVKETGKKPVFIGVVVEI
NT seq 1695 nt   +upstreamnt  +downstreamnt
atgaaaaatgatgttataaaactaatacccatgggtggacaagcagaaatgggtaaaagt
atgtattgttttgaaattaatgataagatttttataatagattcaggtttccgtttccct
gattccgataaactaggtgttgacatcatcattcctagttttacatatttagaagaaagg
gcagatcaagttgcagcgattattattacacatggtcatgatgatgcgatggctgcatta
ccttacttattacagacgattcatgcaccagtctatgcaccaaaattaacggcactttta
attaaacaaatggtggaacgtttccaacgtcataatcgcgtcaagattaatttagatttg
catcctgtaaatcgtaatgcttcaattgatattgaaggcgtaccagttgaatttttccca
gtaactcattctattccaggaagtgtgggtgtggcgttatggacaagttatggttatctt
gtctatagtggtgaatttattattgattttggagctcctaaagaatttcaatgtgatatt
caaaaaatgatggaaattggtaaaaaaggtgttttggctttgttagttgaatcttcaggt
gctaaacatgatggatatacttcaccaaatcataaattaacgaataaaattgatcatatt
tttgaagatagctatgaaagaattattatttcaagctatgcccaaaatgtttttagaaca
caagaaattatagaattaacaaagaagtataaaagacaaattgttttttatggccgtgat
aaatatgataataccaatacattattaagaatagcacaaagatcaaaaaaaccggtttta
aatgttccagagcatttgctaggagataaagaaaaaattggtaatcctcaatatgatagt
aattatgttattttattgagtggaagtcctcaacgtatctatcatgatatttgtgatatt
attgatggtggggatgatttgttgaaacttagaaaaggtgatacttttattgtagcatct
ccagttttacctggaactgaaaagattgccaataaagcacataatggattatataaaaca
gatgcccatgtgcatttattaaaaaataaagatttattttcaatgcatgcttcaaaagaa
gatattaaagttattattcaaatttttaaacctcaatactatattccaatgaaaggcgaa
tatcaacattttatttttaatcaacaaattgctcaagacatggatattccaaatgatcat
attatcattattgataatggcgaacgtataacttttgaaaaaggaaagcttttagataca
cgtgatgtttttgaaattgatgatgtgatgattgatggtattgggattggtgatgttgga
gaaaaagttattgatgatcgtatccaacttgctaacgatggtgtcgttattgttggtcta
acaatatctagagaaaccaaagaaattgtcgcacaaacagattgtcaaacacgcggtttt
gtctatttgaaagattctgaatatgtgattaaacatgttattgaaatttgtgaaaaagtt
gttggtcagttaaaagagaatcctgaaatggaaattgctgaaataagaagtatgatgaaa
gatcaatcaatgaaatatattgtgaaagaaactggcaagaaacctgtatttattggtgtt
gttgtcgaaatataa

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