Allocoprobacillus halotolerans: NMU03_14470
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Entry
NMU03_14470 CDS
T09839
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
ahq
Allocoprobacillus halotolerans
Pathway
ahq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NMU03_14470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahq03019
]
NMU03_14470
Messenger RNA biogenesis [BR:
ahq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NMU03_14470
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GFIT
Motif
Pfam:
RNase_J_C
RNase_J_b_CASP
Lactamase_B_2
Lactamase_B
RMMBL
Motif
Other DBs
NCBI-ProteinID:
UTY38784
UniProt:
A0ABY5I0F0
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Position
complement(2481643..2483337)
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AA seq
564 aa
AA seq
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MKNDVIKLIPMGGQAEMGKSMYCFEINDKIFIIDSGFRFPDSDKLGVDIIIPSFTYLEER
ADQVAAIIITHGHDDAMAALPYLLQTIHAPVYAPKLTALLIKQMVERFQRHNRVKINLDL
HPVNRNASIDIEGVPVEFFPVTHSIPGSVGVALWTSYGYLVYSGEFIIDFGAPKEFQCDI
QKMMEIGKKGVLALLVESSGAKHDGYTSPNHKLTNKIDHIFEDSYERIIISSYAQNVFRT
QEIIELTKKYKRQIVFYGRDKYDNTNTLLRIAQRSKKPVLNVPEHLLGDKEKIGNPQYDS
NYVILLSGSPQRIYHDICDIIDGGDDLLKLRKGDTFIVASPVLPGTEKIANKAHNGLYKT
DAHVHLLKNKDLFSMHASKEDIKVIIQIFKPQYYIPMKGEYQHFIFNQQIAQDMDIPNDH
IIIIDNGERITFEKGKLLDTRDVFEIDDVMIDGIGIGDVGEKVIDDRIQLANDGVVIVGL
TISRETKEIVAQTDCQTRGFVYLKDSEYVIKHVIEICEKVVGQLKENPEMEIAEIRSMMK
DQSMKYIVKETGKKPVFIGVVVEI
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatgatgttataaaactaatacccatgggtggacaagcagaaatgggtaaaagt
atgtattgttttgaaattaatgataagatttttataatagattcaggtttccgtttccct
gattccgataaactaggtgttgacatcatcattcctagttttacatatttagaagaaagg
gcagatcaagttgcagcgattattattacacatggtcatgatgatgcgatggctgcatta
ccttacttattacagacgattcatgcaccagtctatgcaccaaaattaacggcactttta
attaaacaaatggtggaacgtttccaacgtcataatcgcgtcaagattaatttagatttg
catcctgtaaatcgtaatgcttcaattgatattgaaggcgtaccagttgaatttttccca
gtaactcattctattccaggaagtgtgggtgtggcgttatggacaagttatggttatctt
gtctatagtggtgaatttattattgattttggagctcctaaagaatttcaatgtgatatt
caaaaaatgatggaaattggtaaaaaaggtgttttggctttgttagttgaatcttcaggt
gctaaacatgatggatatacttcaccaaatcataaattaacgaataaaattgatcatatt
tttgaagatagctatgaaagaattattatttcaagctatgcccaaaatgtttttagaaca
caagaaattatagaattaacaaagaagtataaaagacaaattgttttttatggccgtgat
aaatatgataataccaatacattattaagaatagcacaaagatcaaaaaaaccggtttta
aatgttccagagcatttgctaggagataaagaaaaaattggtaatcctcaatatgatagt
aattatgttattttattgagtggaagtcctcaacgtatctatcatgatatttgtgatatt
attgatggtggggatgatttgttgaaacttagaaaaggtgatacttttattgtagcatct
ccagttttacctggaactgaaaagattgccaataaagcacataatggattatataaaaca
gatgcccatgtgcatttattaaaaaataaagatttattttcaatgcatgcttcaaaagaa
gatattaaagttattattcaaatttttaaacctcaatactatattccaatgaaaggcgaa
tatcaacattttatttttaatcaacaaattgctcaagacatggatattccaaatgatcat
attatcattattgataatggcgaacgtataacttttgaaaaaggaaagcttttagataca
cgtgatgtttttgaaattgatgatgtgatgattgatggtattgggattggtgatgttgga
gaaaaagttattgatgatcgtatccaacttgctaacgatggtgtcgttattgttggtcta
acaatatctagagaaaccaaagaaattgtcgcacaaacagattgtcaaacacgcggtttt
gtctatttgaaagattctgaatatgtgattaaacatgttattgaaatttgtgaaaaagtt
gttggtcagttaaaagagaatcctgaaatggaaattgctgaaataagaagtatgatgaaa
gatcaatcaatgaaatatattgtgaaagaaactggcaagaaacctgtatttattggtgtt
gttgtcgaaatataa
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