Aeromonas hydrophila subsp. hydrophila AL09-71: V428_01980
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Entry
V428_01980 CDS
T03192
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
ahr
Aeromonas hydrophila subsp. hydrophila AL09-71
Brite
KEGG Orthology (KO) [BR:
ahr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ahr03021
]
V428_01980
Transcription machinery [BR:
ahr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
V428_01980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_10
2Fe-2S_thioredx
MCM3_WHD
Motif
Other DBs
NCBI-ProteinID:
AHX30883
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Position
407693..408547
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AA seq
284 aa
AA seq
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MGTSLQRTMALIPQGSLEGYIQAVNSIPVLSAEEERELAERLQQGGDLEAARQLVMSHLR
FVVHVAKSYAGYGLPQADLVQEGNIGLMKAVKRFDPSVGVRLVSFAVHWIKAEIHEYVLR
NWRMVKVATTKAQRKLFFNLRKSKKRLGWLNHEEVQAVAADLGVSAADVTEMEARMSNYD
QAFDLVGDDEEEGGFAPVHYLEDKSSDLAATIENDNWDDHATRRLSSALATLDERSQHII
RARWLDDDSKTTLQELADTYGVSAERVRQLEKNALKKLKDAMEA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgggaacttcattgcagcgcactatggctctgattccgcaaggtagtctggaaggctat
atccaggcagtaaactcgattccggtgctgagcgcagaggaagagcgtgaactggctgag
cgtttgcagcagggtggcgatctcgaggctgcccgtcagctcgttatgtcgcacctgcgc
tttgtcgttcatgtcgccaagagttatgctggctacggtctgccccaggccgacctggtg
caggaaggcaacataggcctgatgaaggcggtcaagcgcttcgacccgagtgtcggtgtg
cgcctggtctcctttgccgtgcactggatcaaggccgaaattcacgaatacgtactgcgc
aactggcgcatggtcaaggtggcgaccaccaaggcccagcgcaagctgttcttcaatctg
cgcaaatccaagaaacgtctgggctggctgaaccacgaagaggtgcaggccgttgctgcc
gacctcggcgtctccgccgccgacgtcaccgagatggaagcgcgcatgagcaactacgac
caggcgttcgatctggtcggcgatgacgaagaagagggcggtttcgcaccggttcactat
ctggaggacaaatcctccgatctggcggccaccatcgagaatgacaactgggacgatcac
gcgacccgtcgcctgagctcggccctggctaccctggacgagcgcagccagcacatcatc
cgtgcccgctggctcgacgatgacagcaagaccaccctgcaggagctggccgatacctat
ggcgtttccgccgagcgggtccgtcagcttgagaaaaacgccctcaagaagctgaaggat
gcgatggaagcataa
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