Aeromonas hydrophila subsp. hydrophila AL09-71: V428_02585
Help
Entry
V428_02585 CDS
T03192
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ahr
Aeromonas hydrophila subsp. hydrophila AL09-71
Pathway
ahr00300
Lysine biosynthesis
ahr00470
D-Amino acid metabolism
ahr01100
Metabolic pathways
ahr01110
Biosynthesis of secondary metabolites
ahr01120
Microbial metabolism in diverse environments
ahr01230
Biosynthesis of amino acids
Module
ahr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ahr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
V428_02585 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
V428_02585 (dapF)
Enzymes [BR:
ahr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
V428_02585 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AHX31000
LinkDB
All DBs
Position
541759..542589
Genome browser
AA seq
276 aa
AA seq
DB search
MLIDFSKMHGLGNDFMVVDGVTQKVFFSNEVIKKLADRHFGIGFDQLLLVEPPYDPELDF
HYRIFNADGSEVEQCGNGARCFARFVRLKGLINRDRIAVSTARGRIVLQLEGENQVTVNM
GVPQFEPGKIPFRAQKAEKTYLLRAQEHTVMCGAVSMGNPHCVIEVPSVADAPVATLGPI
MERHERFPERVNVGFMEMVNASEIKLRVFERGVGETLACGTGACAAVVVGISQGKLKERV
TVTLPGGKLTIAWKGPGQPVYMTGPAEHVFDGQIEL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgttgatagatttttccaagatgcacgggctggggaacgacttcatggtggtggatggc
gtcacccagaaggtgtttttcagcaatgaggtcatcaagaagctggcggatcgccacttc
ggcatcggcttcgaccagctgctgctggtggagccgccctatgatcccgagctcgacttt
cactaccgcatcttcaatgccgatggcagcgaggtggagcagtgcggcaacggtgcccgc
tgtttcgcccgcttcgtgcgcctcaaggggctgatcaaccgggatcgcatcgcggtgagc
acggcgcgcggccgcatcgtgctgcagctggaaggggagaaccaggtcacggtcaacatg
ggggtgccccagttcgagccgggcaagatcccgttccgggcccagaaggcggaaaaaacc
tacctgctgcgggcccaggagcatactgtgatgtgcggggccgtctccatgggcaatcct
cactgcgtcatcgaggtgccctcggtggccgatgcgccggtggcgaccctgggtcccatc
atggagcgacacgagcgctttcccgagcgggtcaacgtcggcttcatggagatggtcaat
gccagcgagatcaagctgcgggtgttcgaacgcggggtgggcgagaccctggcctgcggc
accggcgcctgcgccgctgtggtggtgggcatcagccagggcaagctcaaggagcgggtc
accgtcaccctgccgggaggcaagctgaccatcgcctggaaggggccgggtcagccggtc
tacatgaccgggccggccgagcacgtatttgacggtcagatagagttatag
DBGET
integrated database retrieval system
