Aeromonas hydrophila subsp. hydrophila AL09-71: V428_02900
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Entry
V428_02900 CDS
T03192
Name
(GenBank) DEAD/DEAH box helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
ahr
Aeromonas hydrophila subsp. hydrophila AL09-71
Brite
KEGG Orthology (KO) [BR:
ahr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ahr03009
]
V428_02900
Enzymes [BR:
ahr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
V428_02900
Ribosome biogenesis [BR:
ahr03009
]
Prokaryotic type
rRNA helicases
V428_02900
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
P-loop_SecA
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AHX31061
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All DBs
Position
complement(607472..608848)
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AA seq
458 aa
AA seq
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MNNEFSSLNLSPALQDNLASLGYLQMTPIQAQSLPLVLDGKDLIAKAKTGSGKTAAFGLG
LLANLDVNRLEVQALVLCPTRELADQVATEIRRLARTLPNVKLVTLCGGTPTAPQSATLS
FGAHIAVGTPGRILKHLEQGTLELDGLKTLVLDEADRMLDMGFGEDINRVISHAPRDRQT
LLFSATYPEGIAQMSRGVQRNPVEVSVESLHEDSAIEQKLYEVPAGQRLDALGWLLSHYQ
PSSCVVFCNTKRACNDVADHLATKGFSALALNGDLEQRERDQVLVRFANGSATILVATDV
AARGLDIKELGAVINYELTYDPEVHVHRIGRTGRAGQQGLALSLYQPNEAQRVNFIEEYQ
QAPIPQGDLAGIGRDIKPIAPQMVTLSIDAGRKSKVRAGDILGALTGEGGIAGADVGKIQ
ISEQYSYVAVKRQVASAALKRLQEGKIKGRSYRARKLG
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaacgaatttagcagcctgaacctctcccccgccctgcaggacaacctcgccagc
ctgggttatctgcagatgaccccgatccaggcccagagtctgcccctggtactcgatggc
aaagatctgatcgccaaggcaaaaaccggcagcggcaagaccgcggccttcggcctcggc
ctgcttgccaacctcgatgtcaaccggctcgaggtgcaggcgctggtgctctgtccgact
cgcgagctggccgatcaggttgccaccgagatccgccgtcttgcccgtaccctgcccaac
gtcaagctggtcaccctgtgcggcggcaccccgaccgcaccgcaatccgccaccctgagc
tttggcgcccacatcgccgtcggcaccccgggccggatcctcaagcacctggagcagggc
accctcgagctggacggcctcaagacgctggtgctggacgaagcggatcgcatgctggac
atgggctttggcgaagacatcaaccgggtcatcagccacgccccgcgcgaccgccagacc
ctgctgttctccgccacctatccggaggggatcgcccagatgagccgcggcgtgcagcgc
aacccggtcgaggtaagcgtggagtccctgcacgaagacagcgccatcgagcagaagctg
tatgaagtgccggccggccagcgcctcgacgccctcggctggttgctcagccactaccag
ccgagctcctgcgtggtgttctgcaacaccaagcgggcctgcaacgacgtggccgatcac
ctggccaccaagggcttctcggcgctggcgctgaacggcgacctggagcagcgcgagcgg
gatcaggtgctggtgcgcttcgccaacggcagcgccaccatcctggtggccaccgacgtg
gcagcccgcggcctcgacatcaaggagctgggcgccgtcatcaactacgagctgacctac
gaccccgaggtgcacgtgcaccggatcggtcgtaccggccgcgccggccagcaaggcctg
gccctgagcctctaccagccgaacgaggcccagcgcgtcaacttcatcgaggaataccag
caggcccccattccccagggcgacctggccgggatcggtcgcgacatcaaaccgatcgcg
ccgcagatggtgaccctctccatcgatgcgggccgcaagagcaaggtgcgcgccggtgac
atcctcggcgctctgactggcgaaggcggcattgccggggccgatgtgggcaagatccag
atttccgagcagtactcctacgtggcggtgaagcgccaggtggcgagcgccgccctcaag
cggctgcaggaaggcaagatcaaggggcgcagctaccgcgctcgcaagctgggctaa
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