Aeromonas hydrophila subsp. hydrophila AL09-71: V428_07605
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Entry
V428_07605 CDS
T03192
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ahr
Aeromonas hydrophila subsp. hydrophila AL09-71
Brite
KEGG Orthology (KO) [BR:
ahr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ahr03009
]
V428_07605 (rimO)
Enzymes [BR:
ahr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
V428_07605 (rimO)
Ribosome biogenesis [BR:
ahr03009
]
Prokaryotic type
ribosomal protein modification factors
V428_07605 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
DapB_N
Motif
Other DBs
NCBI-ProteinID:
AHX31953
LinkDB
All DBs
Position
complement(1641445..1642773)
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AA seq
442 aa
AA seq
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MSNTKQAPKVGFVSLGCPKNLVDSERILTQLRTEGYDVVPSYDDAEVVVVNTCGFIDSAV
QESLEAIGEALAENGKVIVTGCLGAKENQIREIHPKVLEITGPHAYEEVLGHVHKYVEKP
THNPFTSLVPAQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLAEAKR
LKEAGVKEILVISQDTSAYGVDVKHRTGFYDGMPVKTSMVALCEELAKLGMWVRLHYVYP
YPHVDDVIPLMRDGKVLPYLDIPLQHASPRILKLMKRPGTVERTLERIQKWREICPEITL
RSTFIVGFPGETEEEFQMLLDFIDKAELDRVGCFKYSPVEGAKANELPDPVPEEVQEERF
QRFMELQQQVSIRKLARKVGKEMLVLIDEVDEEGATGRSAADAPEIDGLVYLNGETGLKP
GDMVKVRIDEADEYDLWASLID
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacacaaaacaggcccccaaagtaggattcgtctccttgggttgccccaaaaat
ctggtcgattccgagcgcatcctgacccagctgcgtaccgaagggtacgacgtggtgccc
agctatgacgatgcggaagtggtggtggtcaacacctgcggcttcatcgacagcgcggta
caggagtccctggaagccattggcgaggccctggccgagaacggcaaggtgatcgtcacc
ggctgcctcggtgccaaagagaaccagatccgcgagatccaccccaaggtgctcgagatc
accggtccccacgcctatgaagaggtgctgggccacgtccacaagtacgtcgagaagccg
acccacaaccccttcaccagcctggtaccggctcagggcgtcaagctgaccccccgccac
tacgcctatctgaagatttccgaaggctgcaaccaccgctgcaccttctgcatcatcccc
tccatgcgcggggatctggtgagccgtcccatcggcgaagtgctggccgaggccaagcgc
ctgaaagaggccggtgtgaaagagatcctggtgatctcccaggacacctccgcctacggt
gtcgacgtcaagcaccgcaccggtttctacgacggcatgccggtcaaaacaagcatggtg
gccctgtgcgaagagctggccaagctcggcatgtgggtgcgcctgcactacgtctacccg
tacccgcacgtggatgacgtcatcccgctgatgcgcgacggcaaggtactgccctacctc
gacatcccgctgcaacacgccagcccgcgcatcctcaagctgatgaagcgcccgggcacc
gtcgagcgcaccctggagcggatccagaagtggcgcgagatctgtcccgagatcaccctg
cgctccaccttcatcgtcggcttccccggcgaaaccgaagaagagttccagatgctgctg
gacttcatcgacaaggcggagctggatcgggtcggctgcttcaaatacagcccggtcgaa
ggtgccaaggccaacgagctgccggatccggtgccggaagaggtgcaggaagagcgcttc
cagcgcttcatggagctgcaacagcaggtttccatccgcaagctcgcccgcaaggtcggc
aaggagatgctggtgctgatcgacgaggtggacgaagagggtgccaccggccgctccgcc
gccgatgcccccgaaatcgacggtctggtctacctgaacggtgaaaccggcctcaagccc
ggcgacatggtcaaggtccgcatcgatgaagcggacgagtacgacctgtgggccagtctc
atcgactga
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