Aeromonas hydrophila subsp. hydrophila AL09-71: V428_08915
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Entry
V428_08915 CDS
T03192
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ahr
Aeromonas hydrophila subsp. hydrophila AL09-71
Pathway
ahr03030
DNA replication
ahr03430
Mismatch repair
ahr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ahr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
V428_08915
03430 Mismatch repair
V428_08915
03440 Homologous recombination
V428_08915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ahr03032
]
V428_08915
03400 DNA repair and recombination proteins [BR:
ahr03400
]
V428_08915
Enzymes [BR:
ahr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
V428_08915
DNA replication proteins [BR:
ahr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
V428_08915
DNA repair and recombination proteins [BR:
ahr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
V428_08915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AHX32206
LinkDB
All DBs
Position
1912935..1913669
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AA seq
244 aa
AA seq
DB search
MNTPQLNRQIILDTETTGMNTAGGPVYLGHRIIEIGCVEVINRKLTGNHFHVYIKPDRLV
DPEAIQVHGITDEFLRDKPSFSQIADEFIEFIRGAELIAHNAPFDVSFMDYEFGKLGLNF
KTADICGITDTLAMARDLFPGKRNNLDVLCDRYGIDNSHRTLHGALLDAEILADVYLLMT
GGQTKLNLATESSENESNQDTSIRRLESNRPPLKVIRASAEIEAVHEARLDLVQKKGGAC
LWRQ
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgaacacaccccaactgaatcgccagatcattctggatactgaaaccacaggtatgaac
accgccggtggccccgtctatctgggacaccgcatcatcgagatcggctgtgtggaggtg
atcaaccgcaagctgaccggtaaccacttccacgtctacatcaagccggatcggctggtg
gaccccgaggccatccaggtgcacggcatcaccgacgagttcctgcgtgacaagccatcg
ttcagccagatcgccgacgagttcatcgagttcatccgcggtgccgagctgattgcccac
aacgcgccgtttgacgtgagcttcatggactatgagttcggcaagctcggcctcaatttc
aagactgccgacatctgcggcatcacggataccctggcgatggcgcgggacctgttcccg
ggcaagcgcaacaacctcgacgtgctgtgcgatcgctacggcatcgacaactcgcaccgt
accctgcacggggctttgctcgatgcggagatcctggcagacgtctacctgctgatgacg
ggtggccagaccaagttgaatctggctaccgaaagcagtgagaatgagagcaaccaggac
accagcatccgccggctggagagcaatcgcccaccgctcaaggtgatccgtgccagcgcc
gagattgaggcggtgcacgaggcgcggctggatctggtgcagaaaaaaggaggagcctgc
ctgtggcggcaatga
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