Aeromonas hydrophila subsp. hydrophila AL09-71: V428_12920
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Entry
V428_12920 CDS
T03192
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
ahr
Aeromonas hydrophila subsp. hydrophila AL09-71
Pathway
ahr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ahr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
V428_12920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahr03400
]
V428_12920
Enzymes [BR:
ahr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
V428_12920
DNA repair and recombination proteins [BR:
ahr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
V428_12920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AHX32952
LinkDB
All DBs
Position
complement(2787663..2788508)
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AA seq
281 aa
AA seq
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MKFIGAHVSAAGGVENTIARAQAIGANAFALFTKNQRQWQAAPLSETSIRAFKLACEKGG
FRPEQILPHDSYLINLGHPDPDGLAKSRDAFLDEMKRCEQLGLCYLNFHPGSHLKQIPEA
ASLKLVSESINWALERSQGVTAVIENTAGQGTNLGWSFEHLATIIDGVEDKSRVGICFDT
CHAFAAGYDLRTPEGCEAVFADFDRIVGFEYLKGMHINGAKCTFGSRVDRHHSLREGNLG
EAVFHHIMNDQRFDGIPLILETIDESIWGDEIRWLRSLAKA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatcggagcccacgtcagtgcggccggcggggtggagaataccatcgcccgt
gcccaggccatcggcgccaacgccttcgccctgtttaccaagaaccagcgccagtggcag
gcggcaccgctctccgagaccagcatccgcgccttcaagctggcctgcgagaaggggggc
tttcgccccgagcagatcctgccccacgacagctacctcatcaatctggggcatcccgac
cccgacggcctcgccaagtcccgcgatgcctttctggacgaaatgaagcgctgcgaacag
ctgggactctgctacctcaattttcatccgggcagccacctgaagcagatcccggaggcg
gccagcctcaagctggtgagcgaatccatcaactgggcgctggagcgcagccagggggtg
acggcggtgatcgaaaacaccgccggccagggcaccaacctcggctggtcgttcgagcat
ctggccaccatcatcgacggggtggaagacaagagccgggtcggcatctgctttgacacc
tgtcacgcctttgctgccggttacgatctgcgtacccccgaggggtgcgaggcggtgttt
gccgacttcgaccgtattgtggggttcgagtacctcaaggggatgcatatcaacggcgcc
aagtgcaccttcggcagccgggtcgatcgccaccacagcctgcgagaggggaacctggga
gaggcggtgttccatcacatcatgaatgaccagcgcttcgacggcattccgctgatcctg
gagaccatcgacgagtccatctggggtgacgagatccgctggctgcgcagcctggcgaag
gcatga
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