KEGG   Aeromonas hydrophila subsp. hydrophila AL09-71: V428_13240
Entry
V428_13240        CDS       T03192                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
ahr  Aeromonas hydrophila subsp. hydrophila AL09-71
Pathway
ahr03030  DNA replication
ahr03430  Mismatch repair
ahr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ahr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    V428_13240
   03430 Mismatch repair
    V428_13240
   03440 Homologous recombination
    V428_13240
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ahr03032]
    V428_13240
   03400 DNA repair and recombination proteins [BR:ahr03400]
    V428_13240
Enzymes [BR:ahr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     V428_13240
DNA replication proteins [BR:ahr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     V428_13240
DNA repair and recombination proteins [BR:ahr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     V428_13240
SSDB
Motif
Pfam: RNase_T Rv2179c-like SBS_FAS
Other DBs
NCBI-ProteinID: AHX33002
LinkDB
Position
2854183..2854809
AA seq 208 aa
MLSRLRRHWHGRRVQDPAFAPLYADPPADEWVALDFETTSLDPAQAEIVAIGAVRIQGNR
VLTGEALSIRVQAPASLSEHSVVIHGLRHQDLQQGMTLEAALRLLLAFIGPRELVGYHIA
YDLRILNLACQRCWGLTLAQRGIEVSRLYHDHLYRRYPDAAIDLHLAAISSHLGLPALPA
HDALSDAITAALIFLRLTRGGPLAYPKV
NT seq 627 nt   +upstreamnt  +downstreamnt
atgttgagccgtctgcgccgtcattggcatggccgccgcgttcaagatccggcgtttgcc
ccgctctatgccgacccgcccgctgacgagtgggtggccctcgacttcgagaccaccagc
ctggatcccgcccaggccgagatcgtcgccatcggcgcggtgcgcatccagggcaaccgg
gtgctgaccggcgaggcgctgtccatccgggtacaagcgccagccagcctgagcgaacat
tcggtggtgatccacggtctgcgccatcaggatctgcaacaaggcatgacgctggaagcc
gcactgcgcctgctgctcgcctttatcggcccgcgcgaactggtggggtatcacatcgcc
tacgacctgcgcatcctcaacctcgcctgtcagcgatgttgggggctgaccctggcgcag
cgcgggatagaggtgagccggctctaccacgatcacctctatcgccgctatcccgatgcc
gccatcgacctgcatctggccgccatcagcagccatctgggcctgccggccctgcccgcc
cacgacgccctgagcgatgccatcaccgccgccctcatcttcttgcgcctcacccggggc
gggccactggcttatcccaaagtctaa

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