Aeromonas hydrophila subsp. hydrophila AL09-71: V428_19090
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Entry
V428_19090 CDS
T03192
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ahr
Aeromonas hydrophila subsp. hydrophila AL09-71
Pathway
ahr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ahr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
V428_19090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahr03019
]
V428_19090
03009 Ribosome biogenesis [BR:
ahr03009
]
V428_19090
Messenger RNA biogenesis [BR:
ahr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
V428_19090
Ribosome biogenesis [BR:
ahr03009
]
Eukaryotic type
Pre-60S particles
RNases
V428_19090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AHX34063
LinkDB
All DBs
Position
complement(4166936..4167481)
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AA seq
181 aa
AA seq
DB search
MTVSAQNLVWIDMEMTGLDPEQNVVLEIATIVTDKDLNVLAEGPVIAIHQSDEELAKMDD
WNVNTHTNSGLVARVKASQHDEAKAVAETLEFIRQWVPERTSPLCGNSIGQDRRFMVKHM
SDLEAFFHYRNVDVSTIKELVRRWQPALLDQFKKNGTHQALDDIRESIAELQFYRSHVFK
I
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcagcgcgcagaacctggtatggatcgacatggagatgacgggtctggacccc
gaacagaatgtggtactggagatcgccaccatcgtcaccgacaaggacctgaacgtgctg
gccgaggggccggtcatcgccattcaccagagcgacgaagagctggccaagatggacgac
tggaacgtcaacacccataccaacagcggtctggtggcccgggtcaaggcgagccagcac
gatgaggcgaaagccgtcgccgagaccctcgagttcattcgccagtgggtgccggagcgt
accagcccgctgtgcggcaacagcatcggccaggatcgccgcttcatggtcaagcacatg
agcgatctggaagccttcttccactatcgcaacgtcgacgtcagcaccatcaaggagttg
gtgcgccgctggcagccggcgctgctggaccagttcaagaagaacggtacccatcaggcg
ctggacgacatccgcgaatccattgccgaactgcagttttaccgtagccacgtcttcaag
atctga
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