Aeromonas hydrophila subsp. hydrophila AL09-71: V428_20000
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Entry
V428_20000 CDS
T03192
Symbol
ruvA
Name
(GenBank) ATP-dependent DNA helicase RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
ahr
Aeromonas hydrophila subsp. hydrophila AL09-71
Pathway
ahr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ahr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
V428_20000 (ruvA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahr03400
]
V428_20000 (ruvA)
DNA repair and recombination proteins [BR:
ahr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
V428_20000 (ruvA)
RecFOR pathway proteins
V428_20000 (ruvA)
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Motif
Pfam:
RuvA_N
RuvA_C
HHH_5
HHH
RecR_HhH
IMS_HHH
HHH_8
HTH_78
Motif
Other DBs
NCBI-ProteinID:
AHX34226
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Position
complement(4353787..4354401)
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AA seq
204 aa
AA seq
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MIGRLRGVVIEKQPPEVLLEVGGVGYEVQMPMSCFYDLPEIGKEATIHTHFVVREDAQLL
YGFNHKQERALFRELIKTNGVGPKLALAILSGMTATQFVLSVEREEISSLVKLPGVGKKT
AERLVVEMKDRLKGWVSHDLFSPAEITLPARESALRAPDSSEEAASALVALGYKPQQASQ
IVSKVAVDGMSVEDIIREALRSLV
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
gtgattggtcgcttgagaggcgtagtcattgagaaacaaccccccgaggtactgttggag
gtcgggggcgtgggctatgaggtacagatgcccatgagctgcttctatgatctgcccgag
atcggcaaggaggcgaccatccacacccacttcgtggtgcgggaagatgcccagctgctc
tatggcttcaaccacaagcaggagcgggcgctgtttcgcgagctgatcaagaccaacggg
gtcggtcccaagctggcgttggccatcctctccggaatgactgccacccagttcgtactg
agcgtcgagcgcgaagagatcagctccctggtcaagttgccgggggtgggcaagaagacc
gccgagcggctggtggtggagatgaaggaccggctcaagggttgggtcagccacgatctc
ttctcgccggccgagatcaccctgcctgccagagagagtgccctgcgggcgccggattcg
agcgaagaggcagccagcgcgctggtggcgctcggctacaagccgcagcaggccagccag
atcgtcagcaaggtcgctgtcgacggcatgtcggtggaagatatcatccgtgaagcactg
cgcagcctggtgtga
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