Aeromonas hydrophila subsp. hydrophila AL09-71: V428_20105
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Entry
V428_20105 CDS
T03192
Name
(GenBank) RNA helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
ahr
Aeromonas hydrophila subsp. hydrophila AL09-71
Brite
KEGG Orthology (KO) [BR:
ahr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ahr03009
]
V428_20105
Enzymes [BR:
ahr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
V428_20105
Ribosome biogenesis [BR:
ahr03009
]
Prokaryotic type
rRNA helicases
V428_20105
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AHX34246
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All DBs
Position
complement(4371851..4373074)
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AA seq
407 aa
AA seq
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MSQSFDDFDLNPALNRALAEMGFTRPTTIQQMVLEPALDGRDILASAPTGTGKTAAFLLP
ALQHLLDFPRRKPGPCRMLVLTPTRELALQVTAHAKALAAHTNLSIETIIGGVSHEEQLP
ALTKTTDIVVATPGRLLEYIEKEEFESHDIEVLVLDEADRMLDMGFIKDVNRIVEEARYR
KHTMLFSATLEGAGLEKFANDILKEPVELHAEPPRSERRPITQWVHLADDAAHKLALLVH
ILKDPETQKAIIFVKTRERLAELSGQLQAAGVSCAWIRGEMEQSKRIESIRKFHEGEVPF
LIATDVAARGIDLPNVSHVINYDMPYGADVYVHRIGRTGRAGNRGCAISLVEAHDMAMVA
KIERYTEERLKRRVIDELRPKHKEARVPVKKKKPKDDKKKSAKKKKK
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgagccagtcctttgatgatttcgacctgaatccagccctcaaccgggccttggccgag
atgggtttcacccgccccaccaccattcagcagatggtgctggagccagccctggacggc
cgcgatattctggcatccgccccgaccggtaccggcaagaccgccgccttcctgctgccc
gccctgcagcacctgctggacttcccgcgccgcaagccgggcccgtgccgcatgctggtg
ctgaccccgacccgcgagctggcgctgcaggtcaccgctcacgccaaggcgctggcggct
cacaccaacctcagcatcgagaccatcatcggcggcgtcagccatgaagagcaactgccg
gccctgaccaaaaccaccgacatcgtggtcgccaccccgggccgtctgctcgagtacatc
gagaaagaggagttcgagagccacgacatcgaggtactggtgctggacgaagcggatcgc
atgctggacatgggcttcatcaaggatgtgaaccgcatcgtggaagaagcgcgttatcgc
aagcacaccatgctgttctccgccaccctggaaggggctgggcttgagaagttcgccaac
gatatcctgaaggagccggtggagctgcacgccgagccgccccgcagcgaacgtcgcccc
atcacccagtgggtgcacctggccgacgatgccgctcacaagctggccctgctggtgcat
atcctcaaagatcccgagacccagaaagccatcatcttcgtcaagacccgtgagcggctg
gcggagctgtccggtcagctgcaggcggctggcgtctcctgcgcctggatccgcggcgaa
atggagcagagcaagcgcatcgagtcgatccgcaagttccatgaaggggaagtgcccttc
ctcatcgccaccgacgtggccgcccgcggcatcgacctgcccaacgtcagccatgtcatc
aactacgacatgccctacggcgccgatgtctacgtccaccggatcggccgcaccggccgt
gccggcaaccgcggttgcgccatcagcctggtggaagctcacgacatggcgatggtcgcc
aagatcgagcgctacaccgaagagcgtctcaagcgtcgggtgatcgacgaactgcgcccc
aaacataaagaggcacgggtaccggtgaagaagaaaaagccgaaggacgacaagaagaag
tcggccaagaagaaaaagaagtaa
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