Aeromonas hydrophila subsp. hydrophila AL09-71: V428_21925
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Entry
V428_21925 CDS
T03192
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
ahr
Aeromonas hydrophila subsp. hydrophila AL09-71
Pathway
ahr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ahr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
V428_21925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahr03400
]
V428_21925
Enzymes [BR:
ahr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
V428_21925
DNA repair and recombination proteins [BR:
ahr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
V428_21925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Peptidase_M16_C
Motif
Other DBs
NCBI-ProteinID:
AHX34573
LinkDB
All DBs
Position
complement(4727997..4731347)
Genome browser
AA seq
1116 aa
AA seq
DB search
MFTLYHSNQLDLLKELLVSRIRQAPLSHPFEREQILVQSPGMAQWLKLELAKAFGIAANI
DFPLPASFIWEMFTQVLADVPRQSPYNKGSMSWQLMTILPALLDRPAFAPLAAYLGGDDA
DPAKDPEQVRLWQLCQKVADLFDQYLVYRPDWIARWEQGEGLSQELAGVSGQDWQPELWR
ELVARTLALSPSGYHRANLYEEFIHELQRTATLPGKLPQRVFVFGISALPPRYVEALLAL
GSRPEVEVHLFVTNPCRYYWGDLLDRKTLARLENKLKPGTDIDTLQGPANPLLASMGKLG
RDYLHQLMELEVPQIEAFVDIDELDGKGNIKLLQAIQKDVLELAERGAGQFDLDASHHKS
PLDPADGSLQIHACHGPMRELEVLHDRLLALFEQDSSLTPKDVVVMMPDVNSYGPYIQAV
FGARGQIPFAVSDRAASQESPLLQSFLALLRLPNARFGAGELLAILEVPAVLRRFELDDE
EFNQLRVWVQETGIRWGLDDGYPERFDLPRLSGNSWLFGLRRMLLGFAMGDGEPVAGILP
YADIEGQQGLALGKLAWFVDSLAEFLPRLQQAQPLGEWVACLNALLERFYLADEDEERQL
QLIRSQLADWLAQLGEARFEQPISADLLQDYLGSVLGESRSSQRFLAGQVNFCTLMPMRS
IPFKQVCLLGMNDGVYPRTLPPMGFDLMAVAGRRGDRSRRDDDRYLFLEALLSAQQGLYI
SYQGFSAQDNSDKVPSVLLAELIDYVRQGFVLAGDEQLDDESSGKRLLAHLITQHPLTPY
SHAYFYPTAGSGLFTYAADWLPALHPQRGAANFQSGELPLPPEWGKEQGLELAELLRFYR
QPARYFLNRRLKVWFELNEANIEESEPFELDGLQHYQLKDLLLDAHLAQGDSAMRRERLQ
LTGLLPQGWFGSLLLEDLDEQMGKLAERLRPWVAANEAEKQAVEVDIALAQGQLQGWIDT
QKGRLLVVKPGSFNGKDLLLGWIQHLCLSLSDAPGDTLLFDAKQSLRLARLPADEARPKL
AALVALWMQGMKRPLPFFPSTAWDWLKAIEKDPEKPEAADKAAFTRFNGGYMAKGEGEDA
YVARCFPELDEAVLAQLQALAREHLTPLLKSLEELQ
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccctctaccactccaatcagctggatctgctcaaagagctgctggtgagccgc
atccggcaggcccctctctctcaccccttcgagcgcgagcaaattctggtgcagagcccg
ggcatggcccagtggctcaagctggagctggccaaagccttcggcattgccgccaatatc
gactttccgctgcccgccagctttatctgggagatgttcacccaggtactggcggacgtg
ccgcgccagagcccctacaacaagggctccatgagctggcagctgatgaccattctgccc
gccctgctcgatcgcccggcctttgcgccactggccgcctatctgggcggggatgacgcg
gatcctgccaaggatcccgagcaggtgcggctgtggcagctctgccagaaggtagcggat
ctgttcgaccagtatctggtctaccggccggactggatcgcccgctgggaacagggggag
gggttgagccaggagctggccggagtgagcggtcaggattggcagccggagctgtggcgc
gagctggtggcccgcacgttggcgctctctccaagcggctaccaccgtgccaacctctac
gaggagttcatccacgagctgcagcgtaccgccacgctgccgggcaagctaccgcagcgg
gtgttcgtattcggcatctcggcgctgccgccacgctatgtggaggcgctgctggccctc
ggcagccggccggaggtggaggtgcacctgttcgtcaccaacccctgccgctactactgg
ggcgacctgcttgatcgcaagaccctggcgcgcctcgagaacaagctcaagcccggcacc
gacatcgatactctgcaggggcccgccaacccgctgctcgcctccatgggtaagctgggg
cgcgactacctgcaccagctgatggaattggaggtgcctcaaatcgaggccttcgtcgat
atcgacgagctggatggcaagggtaacatcaagctgctgcaggccatccagaaggatgtg
ctggagctggcagaacggggcgccggccagttcgatctcgacgccagccaccacaagagc
ccgctcgatccggcggatggatccctgcagatccacgcctgccacggcccgatgcgtgaa
ctcgaggtgctgcacgaccggctgctggcgctgttcgagcaggacagctccctcaccccg
aaagacgtggtggtgatgatgccggacgtgaacagctacggcccctacattcaggcggtg
tttggcgcgcgcggtcagatccccttcgcggtatcggatcgggcggccagccaggagagc
ccgctgctgcagagtttcctcgccctgctcaggctgcccaacgcccgcttcggggcgggc
gagctgctcgccattctcgaggtgcccgccgtgctgcgccgcttcgagctggatgacgag
gagttcaaccagctgcgggtctgggtgcaggagaccggcatccgctgggggctggatgac
ggctaccccgagcgcttcgatctgccgcgcctctctggcaacagctggctgttcggtctg
cgtcgcatgctgctcggctttgccatgggcgacggcgaaccggtggccggcattctgccc
tacgcagacatcgagggtcagcaggggttggcgctcggcaagctcgcctggttcgtcgac
tcgctggccgaattcttgccccgcctgcaacaggcgcagccgctgggggagtgggtcgcc
tgcctcaacgcactgctggagcgcttctatctggccgacgaggatgaagagcgccagctg
cagcttattcgcagccagctggccgactggctcgcccagcttggtgaggcccgcttcgag
cagcccatcagtgccgacctgttgcaggattacctcggcagcgtgctgggggagtcccgc
tccagccagcgcttcctcgccggtcaggtcaacttctgtaccctgatgccgatgcgctcc
atccccttcaagcaggtctgcctgctcggcatgaacgacggcgtctacccgcgcaccctg
ccacccatggggtttgacctgatggcggtggcgggccggcggggggatcgctcccgtcgt
gatgacgaccgctacctgttcctcgaggcgctgctcagcgcccagcaggggctctacatc
agctatcagggtttcagcgcccaggacaacagcgacaaggtgccctcggtgctgctggcc
gaactcatcgactatgtgcgacagggcttcgtgctggcgggagatgagcagctcgatgac
gagagctccggcaagcgactgctggcgcacctgatcacccagcatccgctcaccccctac
agccacgcctacttctatccgacggcgggttccggcctctttacctatgccgccgactgg
ctgccggccctccatccgcagcgcggcgcagccaacttccagagtggcgagctgccgctc
cctcccgaatggggcaaggagcaggggctggagctggctgagctgctgcgcttctatcgc
cagcccgcccgctacttcctcaaccgccgccttaaggtgtggtttgagctgaacgaagcc
aacatcgaggagagcgaaccgttcgagctggacggtctgcaacattatcagctgaaagac
ctgctgctcgatgctcacctggcacagggggacagtgccatgcgccgcgagcggctgcag
ctcaccggcctgctgccgcaagggtggttcggcagcctgctgctggaggatctggacgag
cagatgggcaagctggcggagcggctgcggccctgggtggcggccaatgaggcagaaaaa
caggcggtggaggtcgatatcgcgctggcccagggtcagctgcaagggtggatcgacacc
cagaagggacgcttgctggtggtcaagcccggcagcttcaacggcaaggatctgttgctg
ggctggatccagcacctctgcctctccttaagcgacgcccccggcgacaccctgctgttc
gacgccaagcagagtctgcggctggccaggctcccggccgatgaggcgcggcccaagctg
gcggcgctggtggcgctctggatgcaggggatgaagcggccgctgcccttcttcccgagc
accgcctgggactggctcaaggcgatcgagaaggatccggagaaaccggaggcggccgac
aaggcggctttcacccgcttcaacggcggctacatggccaagggggagggggaagacgct
tatgtcgcccgctgtttcccggaactcgacgaggccgtgctggcccagttgcaggcactg
gcccgtgaacacttgaccccgctgctcaagagcctggaggagttgcaataa
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