Malaciobacter halophilus: AHALO_0067
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Entry
AHALO_0067 CDS
T05822
Name
(GenBank) DEAD-box ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ahs
Malaciobacter halophilus
Pathway
ahs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AHALO_0067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahs03019
]
AHALO_0067
03009 Ribosome biogenesis [BR:
ahs03009
]
AHALO_0067
Enzymes [BR:
ahs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AHALO_0067
Messenger RNA biogenesis [BR:
ahs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AHALO_0067
Ribosome biogenesis [BR:
ahs03009
]
Prokaryotic type
rRNA helicases
AHALO_0067
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
NAT10_TcmA_helicase
Flavi_DEAD
AAA_30
HigA_N
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AXH08487
UniProt:
A0A2N1J132
LinkDB
All DBs
Position
complement(65919..67355)
Genome browser
AA seq
478 aa
AA seq
DB search
MTFKEFNFKTNLQKSIDDAGFKEPSPIQQDAIPVILKGKDIVGQAHTGTGKTAAFGLPVL
NMMKCNKEVETVVIVPTRELAMQVSDELFKFGKNLNINTATVYGGQSYSRQLKHISNASV
LIATPGRFLDLLRGKKIEIKPNFVILDEADEMLDMGFLDDIKEIFTYMPENRQTLMFSAT
MPSAIKQLAKNILNEPEFITITKSEITNSKIKQSFYVVDEYERDDALLRLYDYKNPEKSI
IFCRTKKEVDRLSTFLVSQGFSAKGLHGDMEQRQREEAINAFKKGRLEVLIATDVAARGL
DVNDVTHVFNYHLPFDSESYVHRIGRTGRAGKDGMAVSIVTPHEFRMLQKIQKTTGGKLE
AKTIPNIKSVKDKKTTTLIGKIKEQEVDEAALKIVEELKEDYDISTIAFKLASMLTNSTY
VKGNNSIGKSHKDIQKLIESAARHGGRDNRRGGNHRRRGGNFRNRSKSNSSNRRRRSN
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
gtgacttttaaagagttcaatttcaaaacaaatttacaaaaatcaattgatgatgcaggt
tttaaagagcctagtccaattcagcaagatgcaattcctgttattttaaaaggaaaagat
atagttggtcaagctcatacaggtacaggaaaaactgcagcatttggtttaccagtttta
aatatgatgaagtgcaataaagaagtagaaacagttgtaattgttcctacaagagaactt
gcgatgcaagtatcagatgagttatttaagtttggtaaaaatctaaatataaatactgca
acagtttatggtggacaatcatatagcagacaattaaagcatatctctaatgcttcagtt
ttaatagcaactcctggtaggtttttagacttattaagaggtaaaaaaatagaaatcaag
cctaactttgtgattcttgatgaagcagatgaaatgctagatatgggatttttagatgat
attaaagagatatttacatatatgccagaaaatagacaaacacttatgttttcagcaact
atgccaagtgcaattaagcaattagcaaaaaatatattaaatgaaccagagtttattact
attacaaaaagtgaaataacaaactcaaaaatcaaacaatcattttatgtagtagatgag
tatgaaagagatgatgccctactaagattatatgattataaaaatccagagaaatctatt
attttttgtcgaacaaaaaaagaagttgatagactttctacatttttagtatctcaaggc
tttagtgcaaaaggtcttcatggagacatggaacaaagacaaagagaagaagcaattaat
gcttttaaaaagggaagacttgaagtactaatagctactgatgttgctgctcgtggttta
gatgtaaatgatgtaacgcatgtatttaattaccacttaccatttgattctgaaagttat
gttcatagaattggaagaacaggaagagcaggaaaagatggaatggcagtttcaattgta
actcctcatgaatttagaatgttacaaaagattcaaaaaacaactggtggaaaacttgaa
gctaaaactattccaaatatcaagtcagttaaagataaaaaaactactactttaattgga
aaaattaaagagcaagaggttgatgaagctgcacttaaaatagtagaagagcttaaagaa
gattatgatatttctacaattgcatttaaactagcttcaatgcttacaaactcaacttat
gttaagggtaataactcaattggtaaatcgcataaagatattcaaaaactaattgaaagt
gctgcaagacacggaggaagagataatagaagaggtggaaaccacagaagaagaggtgga
aactttagaaatagaagtaaatctaattcttcaaatagaagacgaagaagtaactaa
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