Malaciobacter halophilus: AHALO_0288
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Entry
AHALO_0288 CDS
T05822
Name
(GenBank) UvrD/REP family helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ahs
Malaciobacter halophilus
Pathway
ahs03420
Nucleotide excision repair
ahs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ahs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AHALO_0288
03430 Mismatch repair
AHALO_0288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahs03400
]
AHALO_0288
Enzymes [BR:
ahs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AHALO_0288
DNA repair and recombination proteins [BR:
ahs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AHALO_0288
MMR (mismatch excision repair)
Other MMR factors
AHALO_0288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
eIF3_p135
AAA_11
Fes1
Nmad4
Motif
Other DBs
NCBI-ProteinID:
AXH08689
UniProt:
A0A2N1J404
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All DBs
Position
284525..286579
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AA seq
684 aa
AA seq
DB search
MSDNFLLSLNDSQKNAAQHIDGALLILAGAGSGKTKTITTRLAYLISIGIDPASILTLTF
TNKAATEMRERAYSLIDPSMVQTPPLLCTFHKFGLLLLKFYMNELGRKNNFIIIDTDDKK
RILKSIDKELPLPLVTSEISKYKNSILTPSEAKAAAQLKLYQEVADVYEKYENYLEKNNL
VDFDDLLLLPYKILCNNEKLAKELSQKYNYIMVDEYQDTNELQYKLLRKLCCTHNNLCVV
GDDDQSIYGWRGATIKNILNFTEHFENTTVVKLEENYRSTNTILDHANQLIEHNRDRLGK
KLVGTRAKGNSVKVYESHDENEETRKLVDDIKKLVLSGEKASDIAILFRVNALSRSLEEG
FNKAGIAYKLVGGMKFYERAEIKDLIAYFRILTNNNDNFSLKRIINKPKRGIGKTTIEKL
DAKSAQSKKPIFQLLEELEPEELAKVVGKKNSRTLKVFMASVMDLKDTLEESKMRFLDSF
EDTFDYRSSYDNAPDGFDRQANIDEFYGYIRDYFIQNPHLGLEDFLNEIALESENSEFSE
EMVSMMSIHASKGLEYKHLFIIGLEEGFFPITGDGSDIEEERRLGYVAITRAMDNLTLSF
VHSRFYKGKRTSLTKSRFLSESGLIKGCLTIEKNSAYKKGDLVKHKIFGMGRVQKAVKAG
KDYKLTINFSGQRRDILSSFVEKI
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacaactttttattatcattaaatgattcacaaaaaaatgcagcccagcatata
gatggtgcattacttattttagcaggtgctggttctggtaaaacaaaaactattaccaca
agattagcatatcttatttcaataggaatagacccagcttcaatattaacactgactttt
acaaataaagcagcaacagagatgagagaaagggcttattcgcttattgatccatcaatg
gtacaaacaccacctttgctttgtacttttcataaatttggattgcttttattaaagttt
tatatgaatgagttaggcaggaaaaacaactttataattattgatactgatgacaaaaaa
agaatattaaaatcaattgataaagagttgcctcttccactagttacaagtgagatttca
aaatataaaaactcaattttaactcctagtgaagcaaaagcagctgcgcaattaaaactc
tatcaagaagtagcagatgtatatgaaaagtatgagaactatttagaaaaaaataatctt
gttgattttgacgatttacttttattaccttataaaattttatgtaataatgaaaaactt
gcaaaagagctgagtcaaaaatataattatattatggtagatgagtaccaagatacaaat
gagttgcaatataaactattaagaaaactttgttgtacacacaacaatctttgtgtagtt
ggtgatgatgaccagtctatttatggttggcgtggtgcaacaataaaaaatatattaaat
tttacagaacattttgaaaatacaacagtagtaaagctagaagaaaattataggtcaaca
aacacaatattagaccatgcaaaccaattaattgagcataatcgtgataggcttggtaaa
aaattagtaggaacaagagcaaagggaaatagtgtaaaagtttatgaatcacacgatgaa
aatgaagagactagaaaattagttgatgacattaaaaaacttgttttaagcggtgaaaaa
gcaagtgatattgcaatactatttagagttaatgctttatcaaggtcattggaagaaggt
tttaataaagctggaattgcatataaattagttggtggaatgaagttctatgaaagagca
gaaattaaagacttaattgcttattttagaatacttacaaacaacaatgataacttctct
ttaaaaagaattataaataaacctaaaagaggaattggaaagacaacaattgaaaaactt
gatgcaaaatcagctcagagtaaaaagccaatttttcaacttttagaggagctagaacca
gaagagttagcaaaagtagtaggaaaaaagaactcaagaacactaaaagtgtttatggcc
tcagttatggatttgaaagatacattagaagagtcaaagatgagatttttagactcattt
gaagatacttttgattatagaagctcttatgataatgctcctgatggttttgatagacaa
gcaaatattgatgaattttatggatatattagggactattttattcaaaatccacattta
ggattagaagattttttaaatgagattgctttagagtctgaaaatagtgagtttagtgaa
gagatggtttctatgatgagtattcatgcttcaaaaggtttggagtataaacatctgttt
attattgggcttgaagaaggatttttccctattacaggagatggaagtgatatagaagaa
gagagaagacttggttatgtagctattacaagagctatggataacttgactttatctttt
gttcattcaaggttttataaagggaaaagaacaagtcttacaaaaagtagatttttaagt
gaaagtggactaataaaagggtgtttaactattgagaaaaactctgcgtataaaaaagga
gatttagtaaaacataaaatctttggcatgggaagagttcaaaaagctgtaaaagctgga
aaagattataaactaactattaattttagtggacaaagacgagatatattatcctctttt
gtagaaaaaatttag
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