Malaciobacter halophilus: AHALO_0916
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Entry
AHALO_0916 CDS
T05822
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III (exonuclease III)
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ahs
Malaciobacter halophilus
Pathway
ahs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ahs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AHALO_0916 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahs03400
]
AHALO_0916 (xth)
Enzymes [BR:
ahs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
AHALO_0916 (xth)
DNA repair and recombination proteins [BR:
ahs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
AHALO_0916 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AXH09300
UniProt:
A0A2N1J5Z2
LinkDB
All DBs
Position
complement(912019..912804)
Genome browser
AA seq
261 aa
AA seq
DB search
MQKYRFISWNVNGIRAVDRKEALKWIDKQDVDILGLQEIKAEENQIPKSIFEKEYKFKHI
NPCSIKGRSGTALYSQIEPFFSDNCLEVDVLKEGRINEAHFNFNNKKIAYFNVYFPNGQS
SDERLDYKMQFYDRFLNYCQKLREDGFSIIVCGDVNTAHTQIDIARPKANEKTSGFLPME
REWITKFLEHGYIDTFRLINGQIKDKYSWWSYRANARANNVGWRIDYFYVSEDLKHNIKD
AFILDDYMGSDHCPIGIEIEL
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaatatagatttatttcgtggaatgtaaatggaattagagccgtagatagaaaa
gaggctttaaaatggatagataaacaagatgttgatattttaggattacaagagattaaa
gcagaagagaatcaaatccctaaatcaatatttgaaaaagagtataaatttaagcatata
aatccttgtagtattaaaggacgttcaggaactgcactttatagtcagattgaacctttt
tttagtgataattgcttagaagtagatgtgctaaaagaaggaagaataaacgaagcacat
tttaattttaataataaaaagattgcatattttaatgtatattttccaaatggacaaagt
tcagatgaaagattggattataaaatgcaattttatgatagatttttaaactattgtcaa
aaactaagagaagatggattttctattatagtttgtggtgatgttaatacagcacataca
cagattgatattgcaagaccaaaagcgaatgaaaaaacatcaggttttttacctatggaa
agagaatggattacaaagttcttagaacatggatatattgatacttttagactaatcaat
ggtcaaataaaagacaaatatagctggtggagctatagagcaaatgcaagagcaaataat
gttggctggagaattgactatttttatgtaagtgaagatttaaaacataacattaaagat
gcttttattttagatgattatatgggaagtgaccactgccctattggtatagaaattgaa
ctataa
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