Malaciobacter halophilus: AHALO_1178
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Entry
AHALO_1178 CDS
T05822
Name
(GenBank) UvrD/REP helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ahs
Malaciobacter halophilus
Pathway
ahs03420
Nucleotide excision repair
ahs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ahs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AHALO_1178
03430 Mismatch repair
AHALO_1178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahs03400
]
AHALO_1178
Enzymes [BR:
ahs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AHALO_1178
DNA repair and recombination proteins [BR:
ahs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AHALO_1178
MMR (mismatch excision repair)
Other MMR factors
AHALO_1178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
AAA_30
AAA_11
ResIII
SLFN-g3_helicase
Bac_DnaA
RFC1
DEAD
T2SSE
NPHP3_N
TrwB_AAD_bind
AAA_16
AAA_7
LXN
Motif
Other DBs
NCBI-ProteinID:
AXH09555
UniProt:
A0A2N1J611
LinkDB
All DBs
Position
1183124..1185103
Genome browser
AA seq
659 aa
AA seq
DB search
MTPLDKIKQSIEENKSFVLQGGAGSGKTETLKEVLEYITENYPDKKVACITHTNLAVDEI
KSRVGEQYTISTIHSFLNSIIKDYKKNISQCISELFKVKKIERKEIEFYEGDEKVQKKKE
HEKYKKIYEKYAKKLFTIQSESIGKAIGKREYDKDPISYNFDLNTRIDELNEIIKSQIKE
MNYNNIKYNETRFDSYNDLTFGHDGLLEISYQLFRTFPKIGKILQDRFDYVFIDEYQDAN
EKIIKVFLECLPETEKTVIGLFGDSMQSIYSDGIGDVQKYISIGLLNEIPKEDNYRCSVQ
VIDFINKIRNDGLRQEVALKHSEKSLDERQGTVNFYYSIVESKPNAFSSPEDKNEYIGKI
NTLINLANSTQANSKLLMLTNKSISVEAGFSKLYDTFAERYQEPKEYIEEVLIRLQFMDL
IELCQSYKNGNYNYILSELKKVGYPIRTIEDKQKLKDDIEHLLGFDGSAIDALNYAFNNN
LIKKSESFDSYMSRKDAFLSDLNNEDYQAFKSNYSSHNTLKKMRDSGIEIEEEEFKELEK
ELKKENFYLGLFSPTVTFNEIINYYNYMNEEIDYITMHKTKGSGIDNVIVVLDEYFWNEY
DFTNLFDSSNNEAKKIDSQKLFYVACSRTKTNLTCVRLIKEDEETLLKQFYPDAINVSL
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgacgcctcttgataagataaaacaatctattgaagaaaataaatcttttgttcttcaa
ggtggtgcaggtagtggtaaaactgaaacattgaaagaggttttagaatatattactgaa
aattatccagataaaaaagttgcttgtattacacatacaaacttagcagttgatgagata
aaatcaagagttggggaacaatacacaattagtacaattcattctttcttaaattcaatt
ataaaagattataagaagaatatatctcaatgtatttctgaactttttaaagttaaaaaa
atagaacgaaaagaaatagagttttatgaaggggacgaaaaagtacagaaaaagaaagaa
catgaaaaatataaaaaaatatatgaaaaatatgcaaaaaagctatttactattcaatct
gaaagtataggaaaagcgatcggaaaaagagaatatgataaagacccaatatcatataat
tttgatttaaacacgagaatagatgagttaaatgaaataataaaaagtcaaattaaagaa
atgaactataataatatcaagtataatgaaacacgctttgatagttataatgatttaact
tttggacatgatggattattagaaatctcatatcaactttttagaacatttcctaaaatt
ggtaaaatccttcaagatagatttgattatgtctttattgatgaatatcaagatgctaat
gagaaaattataaaagtctttttagaatgtctgcctgaaactgaaaaaactgttattggt
ttatttggtgattcaatgcagtcaatttatagtgatggaataggtgatgttcaaaagtac
atctctattggtttattaaacgaaatacctaaagaagataattatagatgttctgttcaa
gttatagattttattaataaaattagaaatgatggtttaaggcaagaggttgcattaaaa
catagtgaaaaaagtttagatgaaaggcaaggtactgtaaatttttattactcaatagtt
gaaagtaaaccaaatgcattttcaagtccagaagataagaatgaatatataggaaaaata
aatacattaataaatttagctaattctactcaggcaaattctaaactattaatgttaaca
aataagtccatttctgtagaagcaggattttcaaagctttatgatacttttgcagaaaga
tatcaagaacctaaagagtatattgaggaagtattaataaggttacagtttatggattta
atagaactttgccaatcttataaaaatggaaattacaattatatattaagtgaactcaaa
aaagttggttatccaattagaacaattgaagataaacaaaaattaaaagatgatattgaa
catttattagggtttgatggaagtgcaattgatgcattaaattatgcttttaataataat
ttaataaaaaaatcagaatcttttgattcatatatgtctagaaaagatgcttttttatct
gatttaaataatgaagattaccaggcttttaaatcaaactatagttctcataatacttta
aagaaaatgcgagattcaggcatagaaatagaagaggaagaatttaaagagttagaaaaa
gaattaaagaaagagaacttttatttaggactattttctcctactgtaacttttaatgaa
ataattaactattacaattatatgaatgaagagattgattatataactatgcacaaaaca
aaaggttcaggtattgataacgttatagtagtattagatgaatatttttggaatgaatat
gattttacaaatttatttgattctagtaataatgaagctaaaaaaattgatagtcaaaaa
cttttttatgttgcatgttcaaggacaaaaacaaatttaacatgtgtgagattaattaaa
gaagatgaagaaactttattaaaacaattttatccagatgcaataaatgtaagtttataa
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