Malaciobacter halophilus: AHALO_2648
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Entry
AHALO_2648 CDS
T05822
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ahs
Malaciobacter halophilus
Pathway
ahs03030
DNA replication
ahs03430
Mismatch repair
ahs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ahs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AHALO_2648 (dnaE)
03430 Mismatch repair
AHALO_2648 (dnaE)
03440 Homologous recombination
AHALO_2648 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ahs03032
]
AHALO_2648 (dnaE)
03400 DNA repair and recombination proteins [BR:
ahs03400
]
AHALO_2648 (dnaE)
Enzymes [BR:
ahs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AHALO_2648 (dnaE)
DNA replication proteins [BR:
ahs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AHALO_2648 (dnaE)
DNA repair and recombination proteins [BR:
ahs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AHALO_2648 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
MoCF_biosynth
MCM10_OB
Motif
Other DBs
NCBI-ProteinID:
AXH10973
UniProt:
A0A2N1J0C5
LinkDB
All DBs
Position
2745305..2748853
Genome browser
AA seq
1182 aa
AA seq
DB search
MSDIPKFTHLHLHTEYSLLDGANKIKPLAKKVKAMGMDSVAMTDHGNMFGAIDFYNAMRA
EGIKPIIGMEAYIHNSEEVDDKTTKQRFHLCLYAKNDTGYKNLMYLSSQAYMYGFYYYPR
INKKLLRENSEGLVCSAACLQGEINWHLNTNNERNVRNGAKGYERAKEIALEYKEIFGDD
FYLEIMRHGIADQLFVDDMILKIAHETGIKVVATNDTHYLEQKDANPHEAFMCIAMNKLF
DDPNRLRHSVHEFYLKSPEQIAKLYADIPEAIQATQEIANKCNLEIKLGNPTPPNFKFTR
QKLEEINETIPEPEEEYSLLNDIKLFEYKCWEGLEKRLEIVPKEKHQEYKDRLQVEIDII
NNMKFPGYMLIVWDFVIVAKQMGIPVGPGRGSAAGSLVAYSLFITDIDPMPYGLLFERFL
NPERVSMPDIDMDFCQTRRGEIIDYVIQQYGRANVAQIITFGKLLAKGVIRDVARVLDMP
YSKADAMAKLIPDELGINLADSWEKEPKIKELCDTDPQAKRVWEFALALEGLNRNAGTHA
AGVVISNEPLWKKTPLFKPSGLDTLATQYNGKYVEDVDLIKFDFLGLKTLTVIEEANKLI
EKRHGKRIDFIKTDVNDKGVYDLIQTGNTIGLFQIESDGMQDLCKRLAPSNFEDIIAVLA
LYRPGPMESGMLDDFIDRKHGRAEINYFYDEFDAPLRPILETTYGVIVYQEQVMQIVQTI
GGFSLGGADLVRRAMGKKIKEEMDKLKVQFAQGGVEKGYNKEHCEELFDLIVKFAGYGFN
KSHSAAYALVTFYTSYLKCYYPAEFMAALLTLEKDNTDKVVRYVDEVKRLGLDLFPPDIN
KSDLVFSAKKIENEEVVMFGMGAIKGAGDVAIKSILKARKEGGEFKDLSDFISRIDASKV
NKRVIESLVKAGALDCFEYSRKAMLEQIEQIVEAAGKAMQAKKMATGSLFGDDEELTTVT
VELEHLPEYSSKEILEFEKNTLGFYVSGHPLDEYREQLDAISYTLSSEIDEISDGSEVLF
VGKVETITEKISKKGNKFAILNLMDLHGNIELMMFEDKLNELKNDYKYEEEPLAFKVRIS
KDDQFTRMSLRKIESLDDAKKDKQRVKRVEKIEPPLTIAVPYSNDEDIMYKLFEVIAHNQ
GKRELKIIVKSKLGDIELQSGFKVANNVENLIQNLDGVYKVD
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatatacctaaatttacacatttacatttacatacagagtattcacttttagat
ggtgcaaataaaataaaacctttagcgaaaaaagttaaagcaatgggaatggatagtgtt
gctatgacagaccatggtaatatgtttggggccatagacttttataatgcaatgagagca
gaaggtatcaagcctatcataggaatggaagcatatattcataatagtgaagaggttgat
gataaaactacaaaacagagatttcacttatgtttgtatgcaaaaaatgatactggatat
aaaaaccttatgtatttaagctcacaagcttatatgtatggtttttattattatccaaga
ataaataaaaagcttttaagagagaattctgaaggattagtttgttctgctgcttgttta
caaggagagataaactggcacttaaatacaaataatgaaagaaatgttagaaatggtgca
aaaggttatgaaagagcaaaagagattgcattagagtataaagagatttttggagatgat
ttttatttagaaatcatgagacatggtattgctgaccaactttttgttgatgacatgatt
ttaaaaattgctcacgaaacaggaataaaagttgttgcaacaaatgatactcactattta
gaacaaaaagatgctaatcctcatgaagcatttatgtgtattgcaatgaataaacttttt
gatgacccaaatagacttagacactcagtacatgaattttatttaaaatcaccagaacaa
attgcaaaattatacgcagatattcccgaagcaatacaagcaactcaagaaatagcaaat
aaatgtaatttagagataaaactaggaaatcctactcctccaaactttaaatttacaaga
caaaaattagaagagattaatgaaactattccagagccagaagaagaatactctttatta
aatgatattaaactttttgagtataaatgttgggagggattagaaaaaagactagaaatt
gttccaaaagagaaacaccaagagtacaaagatagattgcaagttgagatagatattatt
aacaatatgaaattcccaggatatatgcttattgtttgggattttgttattgttgcaaaa
caaatgggtattcctgttggacctggtaggggttcagcagcaggaagtttagttgcgtac
tctttatttattacagatattgacccaatgccttatggcttactttttgagaggtttcta
aatccagaaagggtatcaatgcccgatattgatatggatttttgccaaacaagaagaggt
gaaattattgactatgtaattcagcaatatggtcgtgcaaacgttgcccaaattattact
tttggtaaacttttagcaaaaggtgttattagagatgttgctagagtacttgatatgcct
tactctaaagcagatgctatggcaaaacttattcctgatgaattaggaattaatttagct
gattcttgggaaaaagaaccaaaaattaaagagctttgtgatactgacccacaagcaaaa
agagtttgggagtttgctcttgcattagaaggactaaatagaaatgcaggaactcacgca
gctggtgttgttatttcaaatgagcctttatggaaaaaaacaccactatttaaaccaagt
ggactagatactctagctactcaatataatggtaaatatgttgaagatgttgacttaatt
aaatttgactttcttggacttaaaactttaacagttattgaagaagcaaataagcttatt
gaaaaaagacatggaaaaagaattgactttattaaaactgatgtaaatgacaaaggtgtt
tatgacttaattcaaactggaaatactattggattatttcaaatagaatcagatgggatg
caagacttatgtaaaagattagccccatctaattttgaagatattattgccgttcttgca
ctttatcgaccaggacctatggaatcaggaatgcttgatgattttattgatagaaaacat
ggacgtgcagaaattaactatttctatgatgaatttgatgccccattaagacctattctt
gaaacaacttatggagtaattgtatatcaagagcaagttatgcaaattgttcaaacaatt
ggtggatttagccttggtggtgccgatttagttagacgggcaatgggtaaaaaaattaaa
gaagagatggacaaacttaaagttcagtttgcacaaggtggagtagaaaaaggttataat
aaagaacattgtgaagaactgtttgatcttattgtaaagtttgctggatatggatttaat
aaatcacactcagcagcatatgcattagtaacattttatacttcttatttaaaatgctat
tatccagcagagtttatggcagcacttttaactttagaaaaagataatactgataaagtt
gtaagatatgtagatgaagttaaaagactaggactagacctatttccacctgatattaat
aaatctgatttagtattttctgcaaaaaagattgaaaatgaagaagttgttatgtttggt
atgggtgccattaaaggtgccggtgatgtagcaataaaatccattctaaaagcaagaaaa
gaaggtggtgaatttaaagatttaagtgactttatttcaagaatagatgcaagtaaagta
aataaaagagtaattgagtcattagtaaaagcaggagctcttgattgttttgaatatagt
agaaaagctatgcttgaacaaattgaacaaattgttgaagctgctggaaaagcaatgcaa
gcaaagaaaatggcaacaggctcactttttggagatgatgaagagttaacaactgtaaca
gttgaacttgaacatctaccagagtatagttctaaagagattttagagtttgaaaaaaat
acattaggtttttatgtatcaggacaccctttagatgagtatagggaacaattagatgct
atttcatatactctaagctcagaaattgatgagattagtgatggaagtgaagttttattt
gtaggaaaagttgaaacaattactgaaaaaatatctaaaaaaggtaacaaattcgctatt
ttaaatcttatggacttacatggaaatattgaacttatgatgtttgaagataaattaaat
gagcttaaaaatgactataaatatgaagaagaaccattagcatttaaagtaagaatttct
aaagatgaccagtttacaagaatgagtttaagaaaaattgagagtttagatgatgcaaaa
aaagataaacaaagagttaaaagagttgaaaaaatcgagccacctttaactattgcagtt
ccttattcaaatgatgaagatattatgtataaactatttgaggtgattgcacataatcag
ggcaaaagagagctaaaaattattgtaaaatcaaaacttggagatattgaattacaaagt
ggttttaaagttgcaaataatgtagaaaacctaatacaaaatcttgatggagtatataaa
gtagactaa
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