Antarctobacter heliothermus: ANTHELSMS3_00397
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Entry
ANTHELSMS3_00397 CDS
T04983
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aht
Antarctobacter heliothermus
Brite
KEGG Orthology (KO) [BR:
aht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aht03016
]
ANTHELSMS3_00397 (truB)
Enzymes [BR:
aht01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ANTHELSMS3_00397 (truB)
Transfer RNA biogenesis [BR:
aht03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ANTHELSMS3_00397 (truB)
Prokaryotic type
ANTHELSMS3_00397 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ASP19118
UniProt:
A0A222DZI8
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All DBs
Position
393956..394867
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AA seq
303 aa
AA seq
DB search
MARRRKGRDISGWLVVDKPAGLTSTAVVNKVRWALDAKKAGHAGTLDPEATGVLAVALGE
ATKTVPYITDALKAYRFTVRFGQATNTDDAEGEVIATSDLRPSDEDIKEALHGFVGDIMQ
VPPQFSAVKIDGERAYKRARDGEEMDIAARPLWVEELVLTDRPDADTAELEMICGKGGYV
RSIARDLGKLLGCHGHVLRLRRVWSGPFEASNGLTLEAIEQMARTPELDEHILPLELGLA
DLPELHCTAQGAARLRNGNPGMVIPGNVEYGDEAWASFEGRPLAVGRYKAGELHPSRVFN
LTD
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcaggcgcaagggacgcgacatttcgggttggctggttgtcgacaaacccgca
ggcctgacctcgaccgctgtggtcaataaggtccgctgggcgctggacgcgaaaaaggcg
ggccatgcgggcacgctggaccccgaggcaaccggcgttctggccgtggcgctgggagag
gcgaccaaaacggttccctacatcaccgacgcactcaaggcgtaccgatttaccgtgcgc
ttcggacaggccaccaacaccgacgacgccgagggggaggtgatcgccacatccgacctg
cgccccagtgatgaggacatcaaggaggcgctgcacggttttgtcggcgacatcatgcag
gtgccgccgcaattctctgccgtcaaaatcgacggtgaacgcgcctacaaacgcgcccgc
gatggcgaggaaatggacatcgccgcccgccctctgtgggtcgaggaactggtgctgacc
gaccgccccgacgccgacactgccgaactggaaatgatctgcggcaagggcggttatgtc
cgctctatcgcgcgcgatttgggcaaactgctgggctgtcacggccatgtgctgcggttg
cgcagggtctggtccggtccgtttgaggcaagcaatggcctgacgttggaggcgatcgaa
cagatggcgcgcacgcccgaactggacgagcacatcctcccgctggaactgggtttggcc
gacctgccggaactgcattgcaccgcgcagggcgctgcgcgactgcgaaatggcaacccc
ggcatggtgatccccggcaacgtcgaatacggcgatgaggcttgggcgtctttcgaaggc
cgccctctggccgtgggccgctacaaggcgggtgaattgcacccctcaagggtcttcaac
ctaaccgactag
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