Antarctobacter heliothermus: ANTHELSMS3_01110
Help
Entry
ANTHELSMS3_01110 CDS
T04983
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
aht
Antarctobacter heliothermus
Brite
KEGG Orthology (KO) [BR:
aht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aht03016
]
ANTHELSMS3_01110
Enzymes [BR:
aht01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
ANTHELSMS3_01110
Transfer RNA biogenesis [BR:
aht03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
ANTHELSMS3_01110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Acb1
Corona_NS2A
Motif
Other DBs
NCBI-ProteinID:
ASP19825
UniProt:
A0A222E0T4
LinkDB
All DBs
Position
complement(1163252..1163785)
Genome browser
AA seq
177 aa
AA seq
DB search
MRLFIALPLPETARTTLEALQSRFPTGRTVPFDNLHLTLAFLGDQTEEQAEAIHEGLQTL
RSPAQRLTLSGGTVFGGRHGQAIALEADGGADLTTLHTRVLSRLRGVGIAPERRRFRPHV
TLSRMGARENAGPVLAVLASATVGPFVCDAVSLYASTLHPDGAIHEELSRYPLAVLI
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgttcatcgcccttcccctgcctgaaacggctcgtaccacgctagaggcgttg
cagtcccgctttcccaccggccgcaccgtaccctttgacaacctgcacctgacgctggcc
ttccttggcgaccagaccgaagagcaggccgaggccatccatgaaggtctgcaaaccctg
cggtcccctgcacaacgtctgaccctgtcgggcggcaccgtctttggcggcaggcacggg
caggccatcgcgttggaggctgacggcggtgccgacctgacaacgctgcacacccgggtg
ctgtcgcggttgcgcggcgtgggtatcgcacctgaacgccgccgctttcgcccgcatgta
acgctgtcccggatgggtgcccgcgaaaacgcgggcccggtgctggccgttctggccagc
gcgacggtcggaccatttgtttgtgacgcggtcagcctgtacgcctcgaccctgcatccc
gatggcgcgatccacgaagaactgtcccgctacccgctggccgtgctgatatga
DBGET
integrated database retrieval system
