Antarctobacter heliothermus: ANTHELSMS3_02516
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Entry
ANTHELSMS3_02516 CDS
T04983
Symbol
polC
Name
(GenBank) DNA polymerase III PolC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
aht
Antarctobacter heliothermus
Pathway
aht03030
DNA replication
aht03430
Mismatch repair
aht03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ANTHELSMS3_02516 (polC)
03430 Mismatch repair
ANTHELSMS3_02516 (polC)
03440 Homologous recombination
ANTHELSMS3_02516 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aht03032
]
ANTHELSMS3_02516 (polC)
03400 DNA repair and recombination proteins [BR:
aht03400
]
ANTHELSMS3_02516 (polC)
Enzymes [BR:
aht01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ANTHELSMS3_02516 (polC)
DNA replication proteins [BR:
aht03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ANTHELSMS3_02516 (polC)
DNA repair and recombination proteins [BR:
aht03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ANTHELSMS3_02516 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
DEDDh_C
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ASP21180
UniProt:
A0A222E4W7
LinkDB
All DBs
Position
complement(2590653..2592071)
Genome browser
AA seq
472 aa
AA seq
DB search
MSNPMSKLSLRLRIFLFFCLIALGGTAIVLGALWVGHARALATTPANGFVFAGILASFGF
VALTTGVWLLFDENVAKPIERLSARLRTRAHAGTGTTVDKDAARYLGDLAPAADAITAAL
SENAVSTAQRIANETARLTAEKTQLTALLTEIPVATLLINADDQIVLYDGQAAEVLAQQA
VPRLNAPLADYFDPASIKAARTAMNKGGKEINRPLEGLDGQQSYDARFKPMQGGGYMMII
DAAHIEISPEAARPLVYDFDLMQGRGTAKLDETPIGKLTFTVFDTETTGLLPHKDEIVQI
GAVRVVNGRIVPGEVIDQLVDPRRPIPPASTKVHKVTDAMVAGQPGIARAGRQFHCFARD
SVIVAHNAPFDMAFLQRHKGRMGVVWDHPILDTVLLSAVLFGASETHTLDALCERLDVTI
PEALRHTALGDARATAEVLVRMLPMLEARGLTTFGAVIAETRRHGRLLEDLN
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccccatgagcaagctcagcctacgcctgcggatctttctgtttttctgcctg
atcgcgcttggtgggaccgccatcgtgctgggtgcgctctgggttggacacgcgcgcgcg
cttgccaccaccccggccaacggctttgtctttgctggcatccttgccagtttcggcttt
gtcgcgctcaccaccggcgtctggctgctgtttgatgaaaacgtcgccaaaccgatcgag
cggctgtccgcccggttgcgcacccgagcccacgccgggaccggcacaaccgtggacaag
gacgccgcccgctatctgggcgatctcgcccccgccgccgatgccatcaccgctgccctg
tcggaaaacgccgtctcgaccgcccagcggattgccaacgaaaccgcccgcctgaccgcc
gaaaagacgcaactgaccgccctgctgacggaaatcccggtggccacgctgctgatcaac
gccgacgatcagatcgtgctgtatgacggacaggcggcagaggtgctggcccaacaggcc
gtcccccgcctgaacgcgccgctggccgactacttcgaccccgccagcatcaaggcagcg
cgcaccgccatgaacaaaggcggcaaagagatcaaccgcccgctagaggggctggatggc
caacaaagctatgatgcgcggttcaagccgatgcagggcggcggctatatgatgatcatc
gacgccgcccatatcgaaatctcgccagaggccgcgcgcccgctggtctatgatttcgac
ctgatgcagggccgcggcacggccaagctggatgagacgccgattggcaaactcaccttt
accgtcttcgacacagagaccaccggcctcttgccgcacaaggatgagatcgtgcagatc
ggtgccgtgcgggttgtgaatggccgcatcgtgccgggcgaggtgattgaccaactggtc
gacccgcgccgcccgattccccccgcctcgaccaaggtgcacaaggtgacagatgcgatg
gtcgccgggcagcccggcatcgcccgcgctggacgccagttccactgctttgcacgggat
tccgtgatcgtcgcccataacgcgccgttcgacatggcctttctgcaacgtcacaagggc
cggatgggggtggtctgggatcacccgatcctagacaccgtcctgctgtcggcagtgctg
ttcggggcctccgagacgcacactctggacgccctgtgcgaacggttggatgtcacaatc
ccagaggctttgcgccacaccgcgctgggggacgcccgcgccacggccgaggtgctggtc
aggatgctgcccatgctagaggcgcgcggcctgaccacctttggcgcggtaatcgcagag
acccgccgccacggacggctgctagaggatttgaactag
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