Antarctobacter heliothermus: ANTHELSMS3_04412
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Entry
ANTHELSMS3_04412 CDS
T04983
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aht
Antarctobacter heliothermus
Brite
KEGG Orthology (KO) [BR:
aht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aht03032
]
ANTHELSMS3_04412 (topA)
03400 DNA repair and recombination proteins [BR:
aht03400
]
ANTHELSMS3_04412 (topA)
Enzymes [BR:
aht01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ANTHELSMS3_04412 (topA)
DNA replication proteins [BR:
aht03032
]
Prokaryotic type
DNA Topoisomerases
ANTHELSMS3_04412 (topA)
DNA repair and recombination proteins [BR:
aht03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ANTHELSMS3_04412 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
HC2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ASP23013
UniProt:
A0A222E9Y2
LinkDB
All DBs
Position
complement(4564289..4567003)
Genome browser
AA seq
904 aa
AA seq
DB search
MPVVVVESPAKAKTINKYLGSDYTVLASYGHVRDLPPKDGSVDTEHDFAMKWEIANDSRK
HVAAIAEALKTDDELILATDPDREGEAISWHLKEALTKRRSIKKTTKVERVTFNAITKAA
VTEAMKNPRDIDAPLVEAYLARRALDYLVGFNLSPVLWRKLPGARSAGRVQSVCLRLIVE
REQEIEAFNAREYWQVRAALTTPRGQEFEARLVNLAGKKLDRYDIANVTEAEMAVSAIEK
RALKVMSVEAKPASRNPSAPFMTSTLQQEASRKFGMGAKATMNTAQRLYEAGHITYMRTD
GIDMAPEAVQECRAAIQDRFGKEYVPGSPRIYKNKAKNAQEAHECIRPTDMAKDAEALRL
AEPDQRKLYDLIWKRTLAAQMEGARLERTTVEIGSDDGQVGLRATGQVVLFDGFLKVYEE
GRDEPAEDDDKRLPQIMQSEPAKFAVGSLKSDHAKAMEKGAERGLPAVMSGDGATLATQS
FTNPPPRYTEATLVKKMEELGIGRPSTYASVITTIQDREYVRKEQNRLFPEDKGRIVTIF
LLNFFKRYVEYDFTAALENELDQVSAGDSDYKELLAKFWRDFSAAIAETSDLRISEVLDV
LDEALAPQLYPPREDGSDPRICPKCGQGQLHLKTSRTGGFVGCGNYPECTYTRPIAGEGA
DGEEKVLGEDAGDEIWLKAGRFGPYVQRGEATPENKKPPRASLPKAKGSYLPGWDPADMT
LEKALTLLTMPREVGMHPDGGVVSANLGRFGPYIMHQMPDEEKPVYVNLKEFQEVFEIGM
NHAVELLAHKRANPGRGRQAAKALREMGDHPDGGKMSVMEGRYGAYVKWEKVNATLPKDV
DPKDLTVEAAVALVNEKASKGGKKKPAAKATKKPAAKKAPAKKAPAKKPAAKKAAPKKAG
GDAD
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcgttgtcgtcgaatccccggccaaggccaagacaatcaacaagtatctgggg
tccgattacacggttctggcgtcttacgggcatgtccgcgacctgcctccaaaggacgga
tcggtcgatacagagcacgatttcgccatgaagtgggagatcgccaacgattcgcgtaaa
cacgttgccgccatcgccgaagcgctcaaaaccgatgacgaactgatcctggcaactgac
cccgaccgcgagggggaggcgatcagctggcatctcaaggaggcgctgaccaaacgccgg
tcgatcaagaaaaccaccaaggtggagcgtgtcaccttcaacgccatcaccaaggccgcc
gtgaccgaggcgatgaagaacccccgagacatcgacgcgccgctggtcgaggcctatctg
gcccggcgggcgctggactatcttgtgggctttaacctgtcgccggttctgtggcgcaag
ctgccgggcgcacggtcggcaggacgggtgcagtcggtctgcctgcgtctgatcgttgag
cgcgagcaagagatcgaggcgttcaatgcccgcgaatactggcaggtgcgtgctgcactg
accacgccgcgcgggcaggaattcgaggcgcggctggtcaaccttgctggcaaaaagctg
gaccgctacgacattgccaatgtgaccgaagccgaaatggcggtcagcgcaatcgagaaa
cgtgcgctaaaggtgatgagcgttgaggcaaagcccgcctcacgcaacccctccgcgccc
ttcatgacctcgactttgcagcaagaggccagccgcaagttcggcatgggcgccaaggcg
acgatgaacaccgcgcagcgtctgtatgaggccgggcacatcacctatatgcggaccgac
ggcatcgacatggcgccggaggcggtgcaggaatgccgcgctgcgattcaggatcgcttt
ggcaaggaatatgtgccgggcagcccgcgcatctacaagaacaaggccaagaacgcgcag
gaagcgcacgagtgtatccgccccactgacatggccaaagacgccgaggcgctgcggctg
gcggaaccggatcagcgtaaactgtatgatctgatctggaaacgcacgctggcggcccag
atggaaggcgcgcggctggaacgcaccacggtcgagattggaagcgacgacggtcaggtc
ggcctgcgcgcaaccgggcaggtggtcctgtttgatggctttctcaaggtctacgaagaa
ggtcgtgatgagccggcggaagacgacgacaagcgtttgccgcagatcatgcaaagtgaa
cccgccaaattcgcagttggtagcctcaaatccgaccacgccaaggcgatggaaaagggc
gcggagcgcggtctgcccgccgtaatgtccggcgacggcgcaacactggcgacgcaaagc
tttaccaacccgccgccacgctacacagaggcgacgctggttaaaaagatggaagagttg
ggcataggacgcccctcgacctatgccagcgtcatcaccacgattcaggaccgcgagtac
gttcgcaaggaacagaaccgtctgttccccgaggacaagggccggatcgtgacgatcttt
ctgctgaacttcttcaagcgctatgtggaatatgatttcacggctgcgctggaaaatgag
ctggatcaggtcagcgcaggtgacagcgactacaaggaactgttggccaaattctggcgc
gatttcagcgccgcgattgctgaaacctctgatctgcgcatctccgaagtgttggacgtg
ttggatgaggcgctggccccgcaactgtacccgccgcgtgaggatggcagcgatccgcgt
atctgtccgaaatgcggacaggggcaactgcacctcaagacatcgcgcaccggcggcttt
gtcggctgcggcaactaccctgaatgcacctacacccgcccgattgcgggtgagggcgcc
gatggcgaagagaaggtgttgggcgaggatgcgggcgatgagatctggctcaaggccgga
cgctttggcccctatgtccagcgcggcgaagccacgcccgagaacaagaaaccgccacgc
gcgtcgctgcccaaggccaagggcagctatctgcccggctgggatccggcggatatgacg
ctggaaaaggcgctgacgctgctaaccatgccgcgtgaggtcgggatgcacccggacggc
ggcgtggtcagcgccaaccttgggcgatttggcccctatatcatgcatcagatgccggat
gaggaaaaacctgtctacgtcaacctcaaggagtttcaggaggttttcgaaatcggcatg
aaccacgcggtcgagctgttggcgcataagcgcgccaatccgggacgtggacgtcaggcc
gccaaggcgctgcgcgaaatgggcgaccaccccgatggcggcaagatgtccgtgatggaa
ggccgctatggtgcttacgtcaaatgggaaaaggtcaatgcgaccctgcccaaggatgtg
gacccaaaggacttgacggtagaagcggcggtggcgttggtcaacgaaaaggcctcgaag
ggcggcaagaagaagccggccgccaaagccacgaagaagcctgccgccaaaaaagcacca
gccaagaaggcgcctgccaagaaaccggcggccaagaaggccgcgccgaaaaaggccggg
ggtgacgcggactga
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