Azospirillum humicireducens: A6A40_00870
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Entry
A6A40_00870 CDS
T04409
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ahu
Azospirillum humicireducens
Pathway
ahu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A6A40_00870 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahu03019
]
A6A40_00870 (recQ)
03400 DNA repair and recombination proteins [BR:
ahu03400
]
A6A40_00870 (recQ)
Enzymes [BR:
ahu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A6A40_00870 (recQ)
Messenger RNA biogenesis [BR:
ahu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A6A40_00870 (recQ)
DNA repair and recombination proteins [BR:
ahu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A6A40_00870 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
RecQ_Zn_bind
HRDC
Motif
Other DBs
NCBI-ProteinID:
ANC90579
UniProt:
A0A160JD29
LinkDB
All DBs
Position
203772..205697
Genome browser
AA seq
641 aa
AA seq
DB search
MDSLFSYSNRDASDDASGQRPATALEALRTVFGYDSFRGQQADIIDHVVRGGDALVLMPT
GGGKSLCYQIPALVRDGVTVVVSPLIALMRDQVTALRELGVRAAFLNSSLGPAEAREVER
AMVQGEIDLVYVAPERLVTPRFLDLLDRTRLALFALDEAHCVSQWGHDFRPEYLQLSILH
ERHPMVPRIALTATADVQTRAEIKDKLGLTDARVFLSSFDRPNITYRVVPKKSERQQMLA
FLRENHPEDAGIVYCMSRNKVEEVAAWLNQQGREALPYHAGLPAETREANQDRFIKSEGL
VMVATVAFGMGIDKPNVRFVCHLDPPKSLEAYYQETGRAGRDGLPANAWMAYGMADVVML
RQMLEQSEAGDSHRRVERGKLEALLGFCETPDCRRQVLLNYFNETLPEPCGNCDTCLDPV
ETWDGTVAAQKALSAVYRTGQRYGAGHLIDVLVGNATEKVVQQNHDQLKTFAVGKDLTKV
EWQSVYRQLVATGLLTVDLEYGGFRLTDAGVAVIKGQRVVKLRKDPVLERRRGVHDALRR
HTARGGSVGGGSSGEGVSRSGARGALSAADDALWHALKDCRTALAKAQSVPPYVIFHDST
LLEMVAQRPYDHAAFAHLPGVGGRKLERYADAFLEVIRQHG
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
gtggattcgttgttttcctacagcaaccgggatgcgtcggacgatgcctccggtcaacgg
ccggccacggcgctcgaggcgctgcggacggtgttcggctacgactccttccgcggccag
caggccgacatcatcgaccatgttgtgcgtggcggcgatgcgctggtgctgatgccgacc
ggcggcggcaagtcgctgtgctaccagatcccggcgctggtgcgcgacggggtgacggtg
gtggtctcccccctgatcgccctgatgcgcgatcaggtgacggctctgcgggagcttggc
gtgcgcgccgccttcctcaactcctccctcggcccggcggaggcgcgggaggtggagcgg
gcgatggtgcagggcgagatcgacctcgtctatgtggcgccggaacggctggtgacgccg
cgcttcctcgacctgctcgaccgcacccggctggcgctgttcgcgctggacgaggcgcat
tgcgtgtcgcagtgggggcatgatttccgccccgaatatctgcagctgtcgatcctgcac
gaacgtcacccgatggtgccgcgcatcgcgctgaccgccaccgccgacgtgcagacccgc
gccgagatcaaggataagctggggctgaccgacgcccgcgtcttcctgtccagcttcgac
cggcccaacatcacctaccgcgtggtgccgaagaagagcgagcgccagcagatgctggcc
ttcctgcgcgaaaaccacccggaagacgccggcatcgtctattgcatgtcgcgcaacaag
gtggaggaggtcgcggcctggctgaaccaacagggccgcgaggctctgccctatcatgcc
gggctgccggccgagacgcgcgaggccaaccaggaccgcttcatcaagagcgagggtctg
gtgatggtcgccaccgtcgccttcggcatgggcatcgacaagccgaacgtccgcttcgtc
tgccatctcgacccgcccaagagcctggaagcctattaccaggagaccggccgcgccggc
cgcgacgggctgcccgccaacgcctggatggcctacggcatggccgacgtggtgatgctg
cgccagatgctggagcagtcggaggccggcgacagccaccgccgggtggaacgcggcaag
ctggaggccctgctcggcttctgcgagacgccggactgccgccgtcaggtgctgctgaac
tatttcaacgagacgctgccggagccttgcggcaactgcgacacctgtctggatccggtc
gagacctgggacggcaccgttgcggcgcagaaggcgctgtcggcggtctaccgcaccggg
cagcgctatggcgccggccatctgatcgacgtgctggtcggcaacgccaccgagaaggtg
gtgcagcagaaccatgaccagctgaagaccttcgccgtcgggaaggatttgaccaaggtc
gaatggcaatcggtctaccgccagctggtggcgaccggcctgctgaccgtcgatctggag
tatggcggcttccgcctgaccgatgccggggtggcggtcatcaaggggcaacgggtggtg
aagctgcgcaaggacccggtgctggagcgccgccgcggcgtccacgacgcgctgcgccgc
cacaccgcgcggggcgggtcggtcggcggcggatcgagcggggagggcgtgtcgcgctcc
ggcgcccgcggtgcgctgtcggcggccgacgacgcgctgtggcatgcgctgaaggactgc
cgcacggcgctggccaaggcgcagagcgtgccgccctatgtgatcttccacgacagcacg
ctgctggagatggtggcccagcgcccctacgaccacgcggccttcgcccatctgccggga
gtcggcggccgcaagctggagcgttacgccgacgcctttctggaggtgatccggcagcac
gggtga
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