Azospirillum humicireducens: A6A40_03765
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Entry
A6A40_03765 CDS
T04409
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
ahu
Azospirillum humicireducens
Pathway
ahu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ahu00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
A6A40_03765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ahu03021
]
A6A40_03765
Transcription machinery [BR:
ahu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A6A40_03765
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
DUF3829_2nd
DUF2935
ANG-1
ZapB_rel
Motif
Other DBs
NCBI-ProteinID:
ANC91086
UniProt:
A0A160JED5
LinkDB
All DBs
Position
823807..825807
Genome browser
AA seq
666 aa
AA seq
DB search
MATKAANSVEVSETREESADGPLMDGMGLAVKKMIARGKERGYVTYDELNAALPQDSSSS
EQIEDTMAMLSEMGINIVESEEQDSENSGEGAGEGEGRSSGNLDDDDIGRTDDPVRMYLR
EMGSVELLSREGEIAIAKRIEAGREMMIGAICESPLTIRAILEWHDSLMEGKMLLRDIID
LDATYGGGPDGEEMPEGLAEVVEAAGAGAAPAADAPAGEDGDEPRPPRAEGEGEEGEEGE
EGDNSLSLSAMEAALKPQVIETFENIKATYDKLHKLHEARMAAMQRGEDLGKQTDKKYEK
LKTEMVELMNTVRLNNQRIEQLVEQLYGLNRKLTGFEGRLLRMATDCRVKREDFLNQYFG
HELDPNWQERIRGLNPKTWGKFAEKYDGDIRKTRESIAQVAEEARLPINEFRRIVSTVQK
GEKEASRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKF
STYATWWIRQAITRSIADQARTIRIPVHMIETINKLVRTSRQMLHEIGREPTPEELAERL
MMPLEKVRKVLKIAKEPISLETPIGDEEDSHLGDFIEDKNAVLPLDAAIQANLRETTTRV
LASLTPREERVLRMRFGIGMNTDHTLEEVGQQFNVTRERIRQIEAKALRKLKHPSRSRKL
RSFLDT
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggccacgaaagctgcgaacagcgtggaagtttccgagacgcgggaggaatccgcagac
ggtcctctgatggacggcatgggtttggccgtcaagaagatgatcgcccgcggcaaggag
cgcgggtatgtcacctatgacgagctgaacgcagcgctgccgcaggattcgtcctcgtcc
gagcagatcgaagacacgatggcgatgctgtccgagatgggcatcaacatcgtcgaatcg
gaagagcaggattcggagaacagcggcgagggggcaggcgaaggcgaaggccgttcgtcg
ggcaatctcgacgacgacgacatcggccgtaccgacgacccggtccgcatgtacctgcgc
gagatggggtcggtggagctgctgtcgcgcgaaggcgaaatcgccatcgccaagcggatc
gaagccggccgcgagatgatgatcggtgcgatctgcgaatcgcccctcaccatccgcgcc
atcctggagtggcatgattccctcatggaagggaagatgctgctgcgcgacatcatcgac
ctggacgccacctatggcggcggcccggacggcgaggagatgccggaaggcctggccgag
gtcgtcgaggccgccggtgccggggctgctcccgccgccgatgcgccggccggcgaggac
ggcgacgaaccgcgtccgccgcgcgccgaaggcgagggcgaagagggcgaggaaggcgaa
gagggcgacaacagcctgtcgctgtcggcaatggaagccgcgctgaaaccgcaggtcatc
gagaccttcgagaacatcaaggcgacctacgacaagctgcacaagctgcatgaggcccgc
atggccgcgatgcagcgcggcgaggacttgggcaagcagacggacaagaagtacgagaag
ctcaagaccgagatggtcgagctgatgaacacggtccgcctgaacaaccagcgcatcgag
cagctggtcgaacagctctatggcctgaaccgcaagctgaccggtttcgaaggccgcctg
ctgcgcatggcgaccgactgccgggtgaagcgcgaggacttcctgaaccagtatttcgga
cacgagttggacccgaactggcaggagcgtatccgtggcctcaaccccaagacctggggc
aagttcgccgagaagtacgacggcgacatccgcaagacgcgcgagtcgatcgcccaggtg
gccgaagaggcccgcctgccgatcaacgagttccgccgcatcgtctccaccgtccagaag
ggcgagaaggaagcgagccgcgccaagaaggagatggtcgaggcgaacctgcgtctcgtg
atctccatcgccaagaagtacaccaaccgcggccttcagttcctggacctgatccaggag
ggcaacatcggcctgatgaaggcggtggacaagttcgagtaccggcgcggctacaagttc
tcgacctatgcgacctggtggattcgccaggccatcacccgctccatcgcggaccaggcg
cggaccatccgcatcccggtccacatgatcgagacgatcaacaagctggtccgcaccagc
cgccagatgctgcacgagatcggccgcgagccgactccggaggaactggccgagcgtctg
atgatgccgctggagaaggtccgcaaggtcctgaagatcgccaaggagccgatctccctc
gagacgccgatcggtgacgaggaggattcgcatctcggtgatttcatcgaggacaagaac
gccgtcctgccgctggacgccgccatccaggcgaacctgcgcgagacgacgacccgcgtg
ctcgcctcgctgacgccgcgtgaggagcgtgtgctgcgcatgcgcttcggcatcggcatg
aacaccgaccacactctggaagaggtcggccagcagttcaacgtgacccgcgagcgcatc
cgccagatcgaggcgaaggcgctgcgcaagctgaagcacccgtcgcggtcgcgcaagctg
cgcagcttcctggatacctga
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