Azospirillum humicireducens: A6A40_04515
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Entry
A6A40_04515 CDS
T04409
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ahu
Azospirillum humicireducens
Brite
KEGG Orthology (KO) [BR:
ahu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ahu03016
]
A6A40_04515 (rnd)
Enzymes [BR:
ahu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
A6A40_04515 (rnd)
Transfer RNA biogenesis [BR:
ahu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
A6A40_04515 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
ANC93069
UniProt:
A0A160JIS3
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All DBs
Position
complement(1002887..1004077)
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AA seq
396 aa
AA seq
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MTLITTTDALQAFCQSLAGAEYITVDTEFLREKTYWPQLCLVQVGGPDGAVAIDPLAEGI
DLTPLFALMSDPSVLKVFHAARQDVEIFWHLSGQIPHPLFDTQVAAMVCGFGESVGYETL
VTKLAGARIDKSSRFTDWSHRPLTERQLTYALSDVIHLRPAYEKLKRRLARSGRSHWLEE
EMAILTDPATYQVDPESSYLRLKVRTNKPRFMAILRELAAWREREAQRRDQPRSRVLRDE
ALLEIAAHAPTTVDDLARTRGLGRGFAEGRQGSDVLAAVQAGLDLPDSALPRVEPREEPP
PGLQPIVELLRVLLKMKCDENNVAAKLVASSSELEALAADDAADIPAMHGWRRELFGSDA
LALKHGKIGLAVIDRRVRIVPAGDPRPSAEPVELET
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgacgctcatcacgacaaccgacgcccttcaggccttctgtcagtcgctggcaggggcc
gagtacatcacggtcgacaccgagtttctgcgggaaaagacctattggccgcaactctgt
ctcgtgcaggtcggcggacccgacggcgcggtcgccatcgacccgctggccgagggaatc
gacctgacaccgctgttcgcgctgatgagcgacccgtcggtgctgaaggtgttccacgcc
gcccgccaggacgtggagatcttctggcatctgtcgggccagatcccgcatccgctgttc
gacacccaggtcgcggcgatggtctgcggcttcggcgaaagcgtgggctatgaaacgctg
gtcaccaagctggccggcgcccgcatcgacaagtccagccgcttcaccgactggtcgcac
cggccgctgaccgagcggcagctgacctacgccctgtccgacgtcattcatctgcgcccg
gcctacgagaagctgaagcgccgccttgcccgatccggccgctcgcactggctggaggag
gagatggcgatcctgaccgatccggcgacctatcaggtcgatccggaaagctcgtatctg
cggctgaaggtgcggaccaacaagccgcgcttcatggcgatcctcagggaactggcggcc
tggcgtgagcgcgaggcccagcgccgcgaccagccgcgctcccgcgtgctgcgcgacgaa
gcgctgctggagatcgccgcccacgcccccaccacagtggacgacctcgcccgcacgcgc
gggcttggccgcggcttcgcggagggaaggcaggggagcgatgtgctggccgcggtgcag
gctggactcgacctgccggacagtgccttgccgcgtgtcgaaccgcgcgaggaaccgccg
cccggtctgcaaccgatcgtcgagcttctgcgcgtgctgctgaagatgaaatgcgacgag
aacaatgtcgcggcgaagctcgtggcctcgtcctccgagttggaggcattggcggccgat
gacgccgcagacattccggcgatgcacgggtggcggcgcgagctgttcggcagcgatgcg
ctcgccctgaagcacggcaagatcgggcttgccgtcatcgatcgtcgcgtccgcatcgtt
cctgccggagacccgcgcccatcggccgaaccggtcgaattggaaacttga
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