Azospirillum humicireducens: A6A40_11065
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Entry
A6A40_11065 CDS
T04409
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
ahu
Azospirillum humicireducens
Brite
KEGG Orthology (KO) [BR:
ahu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ahu03032
]
A6A40_11065 (ihfB)
03036 Chromosome and associated proteins [BR:
ahu03036
]
A6A40_11065 (ihfB)
03400 DNA repair and recombination proteins [BR:
ahu03400
]
A6A40_11065 (ihfB)
DNA replication proteins [BR:
ahu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
A6A40_11065 (ihfB)
Chromosome and associated proteins [BR:
ahu03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
A6A40_11065 (ihfB)
DNA repair and recombination proteins [BR:
ahu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
A6A40_11065 (ihfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-DNA_bdg
XPC-binding
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ANC92397
UniProt:
A0A161JHD8
LinkDB
All DBs
Position
complement(2374894..2375175)
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AA seq
93 aa
AA seq
DB search
MTKSELIQRLAERNPHLYQRDIEKIVGTIFDEITEALARGDRVELRGFGAFSIKKRDART
GRNPRTGESVDVGEKCIPFFKTGKQLRERLNTD
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtcggaactgatccagcggctggcggaacgcaatccgcatctgtaccagcgc
gacatcgagaagatcgtcggcaccatcttcgatgagatcacggaagcgctggcgcgcggc
gaccgggtggaactgcgcggcttcggcgccttctccatcaagaagcgggacgcgcgcacg
ggtcgcaacccccggaccggagaatcggttgacgtcggcgagaaatgcattcccttcttc
aagaccggcaagcagctccgggaacgtctgaacacggactga
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