Azospirillum humicireducens: A6A40_11465
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Entry
A6A40_11465 CDS
T04409
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
ahu
Azospirillum humicireducens
Pathway
ahu02020
Two-component system
ahu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ahu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
A6A40_11465 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
A6A40_11465 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ahu03021
]
A6A40_11465 (rpoN)
Transcription machinery [BR:
ahu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A6A40_11465 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
Arg_repressor
HTH_38
Motif
Other DBs
NCBI-ProteinID:
ANC92469
UniProt:
A0A160JHE1
LinkDB
All DBs
Position
complement(2456029..2457645)
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AA seq
538 aa
AA seq
DB search
MALAQRLDLRQAQTLVMTPQLQQAIKLLQLSNIELSDFVDREIEQNPLLERDSGPGDGGS
DPVGDGAGGEAPGGLDGPGGMEANGLSADGLNGRDDGPGMMPSDGRTRDTVEMTSSDTLA
SSSEAPLDTDFENVYGDDRFSDGSDGGSEVYGSYGERGGRSGFEDDDSNLEATLTSEKNL
RDHLTEQLKIDLPDLGDQLIGLALIDMLDEAGWLVGFDAQALAGQLGCGADRVERVLAAC
QRFDPPGIFARSLKECLAIQLREKNRLDPAMAALLDNLELLAARNLPAIMKVCGVDAEDV
ADMVADIRKLNPKPALAFDHTPAQLVTPDILMRANPGGGWLIDLNPDTLPRVLVNHRYFA
RISDSAKSKADKEYLSERFQSANWLVKSLHQRATTILKVASEIIRQQDAFFIHGVSHLRP
LILRDIAEAIGMHESTVSRVTTNKFMATPRGVFELKYFFTSAIQGADGQASHSAEAVRHR
IKTMIDAEKPDDVLSDDKLVEILRAEGIDIARRTVAKYREAMKIPSSVQRRRAKMSRM
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttgctcaacgtctcgaccttcgacaagcccagaccctggtgatgacgccgcag
ctgcagcaggcgatcaagctgctgcagctgtcgaacatcgaactgtcggacttcgtcgac
cgcgagatcgagcagaaccccctgctggagcgcgacagcggccccggcgatggcggcagc
gacccggtgggcgacggggccggcggcgaggcgccgggcgggctggacggccccggcggc
atggaggcgaacggcctcagcgccgacgggctgaacggccgcgatgacgggccgggcatg
atgccgagcgatggacgcacccgcgacacggtggagatgacctcctcggacacgctggcg
tcctcgtccgaggcgccgctcgacaccgatttcgagaatgtctacggcgacgaccgcttt
tccgacgggtcggacggcggcagcgaggtctacggctcctacggcgagcgcggcggccgc
agcggcttcgaggatgacgacagcaacctcgaagcgacgctgaccagcgagaagaacctg
cgcgaccacctgaccgagcagctgaagatcgacctgcccgacctgggcgaccagctgatc
ggactggccctgatcgacatgctggacgaggccggctggctggtcggcttcgacgcccag
gcgctggccgggcagctgggctgcggcgccgaccgggtggagcgggtgctggccgcctgc
cagcgcttcgacccgcccggcatcttcgcccgttcgctgaaggaatgcctcgccatccag
ctgcgcgagaagaaccggctggacccggcgatggcggcgctgctcgacaatctggagctt
ctggccgcgcgcaacctgccggccatcatgaaggtctgcggcgtcgatgccgaggacgtc
gccgacatggtcgccgacatccgcaagctgaacccgaagccggctctggccttcgaccac
accccggcccagctggtcacccccgacatcctgatgcgcgccaatcccggcggcggttgg
ctgatcgacctgaacccggacacgctgccgcgggtgctggtcaaccaccgctatttcgcc
cgcatctccgacagcgccaagtcgaaggccgacaaggagtatctctccgaacgcttccag
tcggccaactggctggtcaagtcgctgcaccagcgcgccaccaccatcctgaaggtggcc
agcgagatcatccgccagcaggacgccttcttcatccatggcgtctcgcacctgcggccg
ctgatcctgcgcgacatcgccgaggccatcggcatgcatgagagcaccgtcagccgcgtc
accaccaacaagttcatggcgaccccgcgcggcgtgttcgagctgaaatacttcttcaca
tcggccatccagggcgccgacggccaggcttcccattccgcggaagcggttcggcaccgc
atcaagacgatgatcgacgccgagaagccggacgacgtgctgtcggacgacaaactggtg
gagattctccgtgccgaagggatcgacattgcgcgaaggacggtcgcgaagtatcgtgaa
gcgatgaaaataccgtcatcggtgcagcgacgccgtgccaagatgtcacgcatgtag
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