Azospirillum humicireducens: A6A40_12190
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Entry
A6A40_12190 CDS
T04409
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ahu
Azospirillum humicireducens
Pathway
ahu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A6A40_12190 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ahu03021
]
A6A40_12190 (rho)
03019 Messenger RNA biogenesis [BR:
ahu03019
]
A6A40_12190 (rho)
Transcription machinery [BR:
ahu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
A6A40_12190 (rho)
Messenger RNA biogenesis [BR:
ahu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
A6A40_12190 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
OB_RNB
AAA_22
NACHT
S1CSD-TOTE-2
AAA
Motif
Other DBs
NCBI-ProteinID:
ANC92590
UniProt:
A0A160JHT1
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All DBs
Position
2612105..2613361
Genome browser
AA seq
418 aa
AA seq
DB search
MHLQELKCKSPAELLAFAEELQIENASTLRKQDMMFAILKQLAENDIPIFGDGVLEVLQD
GFGFLRSPEANYLPGPDDIYVSPSQVRRFGLRTGDTVEGQIRSPKDGERYFALLKVNTIN
FDAPDKVRHRINFDNLTPLYPEERIRMEVEDPTKKNLTGRIVDLVAPLGKGQRGLIVAPP
RTGKTVMLQNIAHSVATNHPEAYLIVLLIDERPEEVTDMARSVRGEVISSTFDEPATRHV
QVAEMVIEKAKRLVEHKRDVVILLDSITRLARAYNTVVPSSGKVLTGGVDANALQRPKRF
FGAARNVEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKLSDKRTFPAIDI
SKSGTRKEELLVDKGTMSKMWILRRILMPMGVTDAVDFLVDKLKHTKSNNEFFESMNQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcatctccaagagctgaagtgcaaaagccccgccgaactgctggcgttcgcggaggag
ctgcagatcgagaacgcgagcacgctgcgcaagcaggacatgatgttcgcgatcctgaag
cagctggccgagaacgacattccgatcttcggcgacggcgttttggaggtgctgcaggac
gggttcggtttcctgcgctcgccggaagccaactatctgccgggtcccgacgacatctac
gtcagccccagccaggtgcgccgtttcggcctgcgcaccggcgacacggtggaagggcag
atccgctcgcccaaggatggtgagcgctacttcgccctgctgaaggtcaacaccatcaat
ttcgatgcgcccgacaaggtccgtcaccgcatcaacttcgacaacctgacgccgctctat
ccggaggaacgcatccggatggaggttgaagaccccacgaagaagaacctcaccggccgc
atcgtcgacctggtggcgccgctcggcaagggacagcgcgggctgatcgtggcaccgccg
cgcaccggcaagacggtgatgctgcagaacatcgcccattcggtcgccaccaaccacccc
gaagcctatctgatcgtcctgctgatcgacgagcgtccggaagaagtgacggacatggcg
cgctcggtccgcggcgaggtcatcagttccaccttcgacgaaccggccacccgccacgtc
caggtcgccgaaatggtgatcgagaaggccaagcggctggtcgagcacaagcgcgacgtg
gtgatcctgctggacagcatcacccgtctggcccgcgcctacaacacggtggtgccgagc
tccggcaaggtgctgaccggcggtgtcgacgcaaacgccctgcagcggcctaagcgcttc
ttcggcgccgcccgcaacgtggaggagggcgggtcgctgaccatcatcgccaccgcgctg
atcgacaccggcagccgcatggacgaggtgatcttcgaagagttcaagggcaccggcaac
tcggaaatcgtgctggaccgcaagctctccgacaagcgcaccttcccggccatcgacatc
tccaagtcgggcacccgcaaggaggagctgctggtcgacaagggcaccatgtcgaagatg
tggatcctgcgccgcatcctgatgccgatgggcgtgaccgatgcggtcgacttcctggtc
gacaagctgaagcacaccaagtcgaacaacgagttcttcgaaagcatgaaccagtaa
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