KEGG   Azospirillum humicireducens: A6A40_14280
Entry
A6A40_14280       CDS       T04409                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
ahu  Azospirillum humicireducens
Pathway
ahu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ahu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A6A40_14280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ahu03019]
    A6A40_14280
Messenger RNA biogenesis [BR:ahu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     A6A40_14280
SSDB
Motif
Pfam: RNase_J_b_CASP Lactamase_B_2 Lactamase_B RMMBL Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: ANC92942
UniProt: A0A160JIG3
LinkDB
Position
3096060..3097553
AA seq 497 aa
MAPNNRARNRNPRPRDDFDGSRPATIPVHGGGPTGPVPGKDEILFLPLGGCSRIGMNMAL
YGHAGKWLIVDAGVAFVGDEMPGIDSLMADPAFIEERMQDVVGLVVTHAHEDHIGAIHHL
WPRLRCPIYASPFASHIIRDRLKEKGAHRAAKVQTFEIGDTLTIGPFRIETIAVTHSIPE
PMSLAIRTAAGTVLHTGDWKFDPDPLIGRTTDVAALKRLGDEGLLAMMCDSTNADVPGST
GSEADARAGLIGAFANRSGAIAVTGFASNVARMTAVAEAAAAVGRKVVLVGRSMLRMEKA
AQACGYLDHVPDFMDVREASWTPRDNLVFLCTGSQGEERAALSRLARNEHRDLWLEEGDT
VIFSARTIPGNEEALAEIHEHLRGMGVEIVTPADAPVHVSGHPKRDDLARMYGLVRPRFA
VPVHGTIEHMEAHARLARACGVERALVPEDGDILRIAKEGTRVIGRIEPRRLANTGRDLI
PWVPPVTVDAKEERVAA
NT seq 1494 nt   +upstreamnt  +downstreamnt
atggcgccgaacaaccgcgcacgcaaccgcaacccgcgtccgcgagatgacttcgacggc
tcccgcccggcgaccattccggtccatggcggcggccccaccggcccagttccgggcaag
gacgagatcctgttccttccgctgggcggctgttcccgcatcggcatgaacatggcgctc
tatggtcatgccggcaaatggctgatcgtcgatgccggcgtcgccttcgtcggcgacgag
atgccggggatcgacagcctgatggccgatccggccttcatcgaagagaggatgcaggac
gtcgtcggcctggtggtgacccacgcgcacgaggaccatatcggcgcgatccaccatctg
tggccgcgcctgcgctgcccgatctatgccagccccttcgcctcgcacatcatccgcgac
cggctgaaggaaaagggcgcccaccgcgccgccaaggtgcagaccttcgagatcggcgac
acgctgaccatcggtcccttccggatcgagaccatcgccgtcacccattcgatccccgaa
ccgatgtcgctggcgatccgcacggcggccggcacggtgctgcacaccggcgactggaag
ttcgatcccgatccgctgatcggccggaccaccgatgtcgccgcgctgaagcgcttgggc
gacgaggggctgctcgccatgatgtgcgacagcaccaacgccgacgtgcccggctcgacc
gggtcggaggccgacgcccgcgccggcctgatcggcgcgttcgccaaccgctcgggcgcc
atcgcggtgactggcttcgcctccaacgtcgcccgcatgaccgcggtggcggaagcggcg
gcggcggtcgggcgcaaggtggtgctggtcggccgctccatgctgcgcatggaaaaggcg
gcgcaggcctgcggctatctcgaccatgtgccggacttcatggatgtccgcgaggcgtcc
tggaccccgcgcgacaacctcgtgttcctgtgcaccggcagccagggcgaggagcgggcc
gcactcagccgtctggcccgcaacgagcaccgcgacctgtggctggaagagggcgacacc
gtcatcttctccgcccgcaccatccccggcaacgaggaggctctggccgaaatccacgag
catctgcgcggcatgggcgtcgagatcgtcaccccggccgatgcgccggtccatgtctcc
ggccaccccaagcgcgacgacctcgcccgcatgtacgggctggtccgcccgcgctttgcg
gttccggtccacggcaccatcgaacatatggaagcccacgcccgcctcgcccgcgcctgc
ggcgtcgagcgtgccctggttccggaggatggcgacatcctgcgcatcgccaaggaaggc
acccgcgtgatcggccgcatcgagcccaggcggctcgccaataccggccgggatctcatt
ccctgggtgccgccagtaacggtggacgccaaggaagagcgcgtcgcggcctga

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