Azospirillum humicireducens: A6A40_14280
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Entry
A6A40_14280 CDS
T04409
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
ahu
Azospirillum humicireducens
Pathway
ahu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A6A40_14280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahu03019
]
A6A40_14280
Messenger RNA biogenesis [BR:
ahu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A6A40_14280
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GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B_2
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
ANC92942
UniProt:
A0A160JIG3
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All DBs
Position
3096060..3097553
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AA seq
497 aa
AA seq
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MAPNNRARNRNPRPRDDFDGSRPATIPVHGGGPTGPVPGKDEILFLPLGGCSRIGMNMAL
YGHAGKWLIVDAGVAFVGDEMPGIDSLMADPAFIEERMQDVVGLVVTHAHEDHIGAIHHL
WPRLRCPIYASPFASHIIRDRLKEKGAHRAAKVQTFEIGDTLTIGPFRIETIAVTHSIPE
PMSLAIRTAAGTVLHTGDWKFDPDPLIGRTTDVAALKRLGDEGLLAMMCDSTNADVPGST
GSEADARAGLIGAFANRSGAIAVTGFASNVARMTAVAEAAAAVGRKVVLVGRSMLRMEKA
AQACGYLDHVPDFMDVREASWTPRDNLVFLCTGSQGEERAALSRLARNEHRDLWLEEGDT
VIFSARTIPGNEEALAEIHEHLRGMGVEIVTPADAPVHVSGHPKRDDLARMYGLVRPRFA
VPVHGTIEHMEAHARLARACGVERALVPEDGDILRIAKEGTRVIGRIEPRRLANTGRDLI
PWVPPVTVDAKEERVAA
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgaacaaccgcgcacgcaaccgcaacccgcgtccgcgagatgacttcgacggc
tcccgcccggcgaccattccggtccatggcggcggccccaccggcccagttccgggcaag
gacgagatcctgttccttccgctgggcggctgttcccgcatcggcatgaacatggcgctc
tatggtcatgccggcaaatggctgatcgtcgatgccggcgtcgccttcgtcggcgacgag
atgccggggatcgacagcctgatggccgatccggccttcatcgaagagaggatgcaggac
gtcgtcggcctggtggtgacccacgcgcacgaggaccatatcggcgcgatccaccatctg
tggccgcgcctgcgctgcccgatctatgccagccccttcgcctcgcacatcatccgcgac
cggctgaaggaaaagggcgcccaccgcgccgccaaggtgcagaccttcgagatcggcgac
acgctgaccatcggtcccttccggatcgagaccatcgccgtcacccattcgatccccgaa
ccgatgtcgctggcgatccgcacggcggccggcacggtgctgcacaccggcgactggaag
ttcgatcccgatccgctgatcggccggaccaccgatgtcgccgcgctgaagcgcttgggc
gacgaggggctgctcgccatgatgtgcgacagcaccaacgccgacgtgcccggctcgacc
gggtcggaggccgacgcccgcgccggcctgatcggcgcgttcgccaaccgctcgggcgcc
atcgcggtgactggcttcgcctccaacgtcgcccgcatgaccgcggtggcggaagcggcg
gcggcggtcgggcgcaaggtggtgctggtcggccgctccatgctgcgcatggaaaaggcg
gcgcaggcctgcggctatctcgaccatgtgccggacttcatggatgtccgcgaggcgtcc
tggaccccgcgcgacaacctcgtgttcctgtgcaccggcagccagggcgaggagcgggcc
gcactcagccgtctggcccgcaacgagcaccgcgacctgtggctggaagagggcgacacc
gtcatcttctccgcccgcaccatccccggcaacgaggaggctctggccgaaatccacgag
catctgcgcggcatgggcgtcgagatcgtcaccccggccgatgcgccggtccatgtctcc
ggccaccccaagcgcgacgacctcgcccgcatgtacgggctggtccgcccgcgctttgcg
gttccggtccacggcaccatcgaacatatggaagcccacgcccgcctcgcccgcgcctgc
ggcgtcgagcgtgccctggttccggaggatggcgacatcctgcgcatcgccaaggaaggc
acccgcgtgatcggccgcatcgagcccaggcggctcgccaataccggccgggatctcatt
ccctgggtgccgccagtaacggtggacgccaaggaagagcgcgtcgcggcctga
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