KEGG   Azospirillum humicireducens: A6A40_19880
Entry
A6A40_19880       CDS       T04409                                 
Symbol
cas8c
Name
(GenBank) type I-C CRISPR-associated protein Cas8c/Csd1
  KO
K19117  CRISPR-associated protein Csd1
Organism
ahu  Azospirillum humicireducens
Brite
KEGG Orthology (KO) [BR:ahu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ahu02048]
    A6A40_19880 (cas8c)
Prokaryotic defense system [BR:ahu02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    A6A40_19880 (cas8c)
SSDB
Motif
Pfam: Cas_Csd1 Phage_TAC_11
Other DBs
NCBI-ProteinID: AWB07308
UniProt: A0A2R4VS76
LinkDB
Position
pYZ3:456852..458660
AA seq 602 aa
MTVLAALNGYYGRLADRGEVPPFGYSTERIAHIIVLSPDGEPVEILPWQSLSGKKSEPRP
TAVPQSFKRPGTTPRSFFLWDNGKFVLGLGVDKVTRQRVAHPANHAAFQELHRRLLAGTE
DAGLAALLRFLDGWSADRFDACGFTDAMLDQNFMFMLDGDRNDRGEPRFLHDRTAARRIW
ERAVAEGAGEEGICLVTGARQPIARLHPAIKGVMDAQSSGASIVSFNNDAFTSYGKEQGL
NAPVSEAAAFGYGAALNALLARGSGNRLVIGDATTVFWADTSGGEESAQRAEVLFHDLLS
PPAAEDADEAQAIRNALLPVSQGRPVREIAPELDERTRFYVLGLSPNIARLSVRFWLEDS
FAAIAERVGRHWEDLRIDPAPWRTAPAVWMLLRETAPLGKTENIAPQLAGEVMRAILTGG
RYPRSLLAAVIIRMRAGDPVNGVKAAICRACLNRDSRLGTKKTEEIPVSLNRDEANPAYR
LGRLFAVLEGAQRAALGDVNASIRDRYFGAASATPASVFPMLLRNSNHHLAVLRKGDKPR
LGGWFEGEIGQILGGLDSGFPRSLRIEDQGRFAIGYYHQRYSGKAAASTEQAVATEQTVS
ED
NT seq 1809 nt   +upstreamnt  +downstreamnt
atgaccgtccttgccgcgctcaacggctattatggccggctggccgaccgtggcgaggtg
ccgcccttcggctattcgacggagcgcatcgcccacatcatcgtcctgtcgcccgatggc
gagccggtggagatcctgccctggcagagcctatcggggaagaagtcggagccgcggccg
acggcggtgccgcaatccttcaagcgtccggggacaacgccgcgctccttcttcctgtgg
gacaacggaaagttcgtgctcggccttggggtggacaaggtgacgcggcagcgggtggcc
catccggccaaccatgcagccttccaggagttgcaccgtcggctgttggccggaaccgag
gatgccgggctggccgccctgttgcgcttcctagatggctggtcggccgaccgtttcgac
gcctgcggtttcaccgacgccatgctcgaccagaacttcatgttcatgctcgacggcgac
cggaatgatcggggggagccgcgcttcctgcacgaccgtaccgccgcccggcgcatctgg
gagcgggcggtggccgagggcgctggggaggagggtatctgcctggtgacgggagcgcgc
cagccgatcgctcgtctgcatcccgcgatcaagggggtgatggacgcgcagagttccggt
gcctccatcgtctccttcaacaatgacgccttcacctcctatggcaaggagcaagggctg
aacgcgccggtgtcggaggcggcggctttcggctacggcgccgccctgaacgcgctgctg
gcgcggggcagcggcaaccggctggtgatcggcgacgcgaccacggtgttctgggccgac
acctccggtggcgaggagtccgcccagagggcggaggtgctgttccacgatctgctcagt
ccgcccgccgccgaggatgccgacgaggcgcaggcgatccgcaacgccctgcttccggtc
agccaggggcggccggtgcgggagattgcgccggagctggatgagcggacacgcttctac
gttctcggcctgtcgccgaacatcgcccggctgtcggtgcgtttctggctggaggacagc
ttcgcggccatcgccgaacgtgtcggccgccattgggaagatctgcggatcgatcccgcg
ccctggcgcaccgcgccggcggtctggatgctgctgcgcgaaaccgctccgctcggcaag
accgagaacatcgcgccgcaactggccggggaggtgatgcgcgccatcctgaccggcggc
cgctatccccgcagcctgctggcggcggtcatcatccgcatgcgggccggcgacccggtg
aatggtgtcaaggccgcgatctgccgggcctgcctgaaccgcgactcccgcctgggaacg
aagaagacggaggagatacccgtgagcctgaaccgagatgaggcgaacccggcctaccgg
ctgggccgcctgtttgccgtgctggagggtgcccagcgggcggccctgggggatgtgaac
gccagcatccgcgaccgctatttcggcgccgcgtcggccaccccggccagcgtcttcccc
atgctgctgcgcaacagcaaccaccatctggcggtgttgcgcaagggcgacaagccccgg
ctcggcggctggttcgaaggggaaatcggccagatcctcggcgggctggacagcggcttt
ccgcgctcgctgcgcatcgaggatcaggggcgattcgccatcggctactaccaccagcgc
tattccggcaaggccgcggcatccaccgaacaggccgtcgccaccgaacagaccgtctcc
gaggattga

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