Actinomyces howellii: NCTC11636_00002
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Entry
NCTC11636_00002 CDS
T06068
Symbol
hup
Name
(GenBank) DNA-binding protein HB1
KO
K03530
DNA-binding protein HU-beta
Organism
ahw
Actinomyces howellii
Brite
KEGG Orthology (KO) [BR:
ahw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ahw03032
]
NCTC11636_00002 (hup)
03036 Chromosome and associated proteins [BR:
ahw03036
]
NCTC11636_00002 (hup)
03400 DNA repair and recombination proteins [BR:
ahw03400
]
NCTC11636_00002 (hup)
DNA replication proteins [BR:
ahw03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NCTC11636_00002 (hup)
Chromosome and associated proteins [BR:
ahw03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
NCTC11636_00002 (hup)
DNA repair and recombination proteins [BR:
ahw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
NCTC11636_00002 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-DNA_bdg
DSBA
DUF2267
DUF7342
Motif
Other DBs
NCBI-ProteinID:
VEG25375
UniProt:
A0A3S4RUQ1
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All DBs
Position
1:1824..2105
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AA seq
93 aa
AA seq
DB search
MSVNRTELIAAIAEKAGLTKTDADAFLGAFQDVLVENVAKGEAVKITGLMGVERVERAAR
TGRNPRTGEEIQIPAGYGVKLTVGSALKKAVAK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcaaccgcaccgagctcatcgctgccatcgctgagaaggccggtctgaccaag
accgacgccgacgccttcctcggagccttccaggacgtcctcgtcgagaacgtcgccaag
ggcgaggccgtgaagatcaccggtctcatgggtgtcgagcgtgtggagcgcgccgcgcgc
accggccgcaacccccgcaccggtgaggagatccagatcccggccgggtacggcgtcaag
ctgaccgtcggctccgcgctcaagaaggccgtcgccaagtga
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