Actinomyces howellii: NCTC11636_00109
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Entry
NCTC11636_00109 CDS
T06068
Symbol
mutM_1
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ahw
Actinomyces howellii
Pathway
ahw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ahw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC11636_00109 (mutM_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahw03400
]
NCTC11636_00109 (mutM_1)
Enzymes [BR:
ahw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
NCTC11636_00109 (mutM_1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NCTC11636_00109 (mutM_1)
DNA repair and recombination proteins [BR:
ahw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCTC11636_00109 (mutM_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DZR
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
VEG25582
UniProt:
A0A3S4R996
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All DBs
Position
1:120607..121629
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AA seq
340 aa
AA seq
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MPELPEVEAVRRGLARHLTGRTVERVEVLDPRPLRRQEGGPQAFSRGLSGRRITGAVRRG
KLLWLPLDDGRALAAHLGMSGQLLVRGTVASPPPEAERRAVTDASADGADLTAQRPPSLV
RDLSVHPRHLRVRLHLVARPGDAPGGAALDLVDQRMLGGMRLSALVPTPDGGPGGEGSAE
PGVPAEATHIARDLLDPLLDRQAVQERAGRSARAVKTLLLDQGLVSGVGNIYADEGLWAA
RVHGSRPGSGIGPAGLGELLDRTAQVMTRALAVGGTSFDALYVDAEGAAGYFARELAAYG
RAGRPCRRCGTALRTERLAGRSHTFCPRCQVPARPTSARR
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgagctgcccgaggtcgaggccgtgcgtcgcgggctggcccggcacctgacgggg
cggaccgtcgagcgggtcgaggtgctcgacccccggcccctgcgccggcaggagggcggg
ccgcaggccttcagccggggcctgagcggccggaggatcaccggggcggtgcggcgcggc
aagctcctgtggctgcccttggacgacggccgggccctggcggcccacctgggcatgagc
ggccagctgctcgtgcgcggcaccgtcgcctccccgccgccggaggcagagcgccgagcg
gtcaccgacgcctcggccgacggcgccgacctgaccgcccagcgtcccccgagcctcgtg
cgcgacctgtcggtgcacccgcgccacctgcgggtgcgcctccacctcgtcgcccgaccc
ggggacgccccgggcggggccgccctcgacctggtcgaccagcgcatgctcggcgggatg
cgcctgagcgccctggtaccgaccccggacggcggcccgggcggcgagggcagcgcggag
ccgggcgtgccggccgaggccacccacatcgcccgcgacctgctcgacccgctcctggac
cgccaggccgtccaggagcgggccggccgctcggcgcgtgcggtcaagaccctcctgctc
gaccagggcctcgtgtcaggggtcggcaacatctacgccgacgagggcctgtgggcggcg
agggtccacggatcccgtcccggctcggggatcggtccggcaggcctcggcgagctgctc
gaccgcaccgcgcaggtcatgaccagggccctggcggtgggagggaccagcttcgacgcc
ctgtacgtcgacgccgagggcgccgccgggtacttcgcccgcgagctcgccgcctacgga
cgggcggggcggccgtgccgcaggtgcggcaccgccctgcgcaccgagcggctcgcagga
cgcagccacaccttctgcccgaggtgccaggtgcctgcgcgacccacctccgcacggagg
tga
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